DRSC/TRiP Functional Genomics Resources

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Protein Alignment OTX1 and gsb-n

DIOPT Version :10

Sequence 1:NP_055377.1 Gene:OTX1 / 5013 HGNCID:8521 Length:354 Species:Homo sapiens
Sequence 2:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster


Alignment Length:342 Identity:93/342 - (27%)
Similarity:140/342 - (40%) Gaps:84/342 - (24%)


- Green bases have known domain annotations that are detailed below.


Human    10 YGMNGLGLAGPAMDLLHPSVGYPATP--RKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVA 72
            |.:||: |.|...| :..:...|..|  |||||.|||||..||:.||..|::|:|||::.|||:|
  Fly   154 YTINGI-LGGRDSD-ISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELA 216

Human    73 LKINLPESRVQVWFKNRRAKCRQQQQSGSGTKSRPAKKKSSPVRESSGSESSGQFTPPAVSSSAS 137
            ....|.|:|:||||.||||:                      :|:.||..:||        .|..
  Fly   217 QTTALTEARIQVWFSNRRAR----------------------LRKHSGGSNSG--------LSPM 251

Human   138 SSSSASSSSANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPASISPGSAPASVSVPEPL--AAP 200
            :|.|::.......:.|.|.||..|:...|...       :|||   ||:......:.:.:  ||.
  Fly   252 NSGSSNVGVGVGLSGATAPLGYGPLGVGSMAG-------YSPA---PGTTATGAGMNDGVHHAAH 306

Human   201 SNTSCMQRSVAAGAA--------------TAAASYPMSYGQGGSYG------QGYPTPSSSYFGG 245
            :.:|....:.||.||              .|...:|..:.|.|.:|      |.|...:...|..
  Fly   307 APSSHHSAATAAAAAHHHTQMGGYDLVQSAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSK 371

Human   246 V--DCSSYLAP-MHSHHHPHQLSPMAPS--SMAGHHHHHPHAHHPLSQSSGHHHHHHHHHHQGYG 305
            :  |..|.::| :|...:..:|.  |||  |.|.:|           .::.::.|...|....|.
  Fly   372 LTADSVSKISPSLHLSDNYSKLE--APSNWSQAAYH-----------AAANYNAHVAQHQLNDYA 423

Human   306 GSGLAFNSADCLDYKEP 322
            .:....|.|....:..|
  Fly   424 AAAAHGNPASAYSHPLP 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OTX1NP_055377.1 Homeodomain 39..95 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..146 9/54 (17%)
TF_Otx 178..274 CDD:427350 29/122 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..305 9/49 (18%)
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199
Homeodomain 183..239 CDD:459649 31/77 (40%)
Blue background indicates that the domain is not in the aligned region.

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