DRSC/TRiP Functional Genomics Resources

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Protein Alignment OTX1 and Rx

DIOPT Version :10

Sequence 1:NP_055377.1 Gene:OTX1 / 5013 HGNCID:8521 Length:354 Species:Homo sapiens
Sequence 2:NP_726006.3 Gene:Rx / 37367 FlyBaseID:FBgn0020617 Length:904 Species:Drosophila melanogaster


Alignment Length:321 Identity:98/321 - (30%)
Similarity:130/321 - (40%) Gaps:88/321 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    36 RKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSG 100
            :|.||.|||||..||..||..|.|:.|||::.|||:|:|:||||.||||||:|||||.|:|::|.
  Fly   557 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKSE 621

Human   101 SGTKSRPAKKKSSPVRESSGSESSGQFTPPAVSSSASSSSSASSSSANPAAAAAAGLGGNPVAAA 165
            |   .|......:.:....|..:||....|.:|.              |..:|..|...:|....
  Fly   622 S---LRLGLTHFTQLPHRLGCGASGLPVDPWLSP--------------PLLSALPGFLSHPQTVY 669

Human   166 SSLSTPAASSIWSPASISPGSAPASVSVPEPLAAPSNTSCMQRSVAA-GAATAAASYPMSYGQGG 229
            .|..||       |.|::||:...|                  |:|| |...|....|..:...|
  Fly   670 PSYLTP-------PLSLAPGNLTMS------------------SLAAMGHHHAHNGPPPPHVGHG 709

Human   230 SYGQGYPTPSSSYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAH---HPLSQSSG 291
            .:||..|.|.             .|.|...|||           |.||..|.:|   | ||:.|.
  Fly   710 GHGQPQPPPP-------------PPPHGVPHPH-----------GSHHVVPLSHLSPH-LSRMSP 749

Human   292 HHHHHHHHHHQGYGGSGLAFNSADCLDYKEPGAAA----------ASSAWKLNFNSPD-CL 341
            |.......|| |....|...:|:     ..|.:.|          :||:..|..:.|| |:
  Fly   750 HATSLGSPHH-GVTPLGTPLHSS-----LPPSSTATTVAVSSSQSSSSSASLECSGPDVCM 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OTX1NP_055377.1 Homeodomain 39..95 CDD:459649 36/55 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..146 12/54 (22%)
TF_Otx 178..274 CDD:427350 21/96 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..305 16/50 (32%)
RxNP_726006.3 Homeodomain 560..616 CDD:459649 36/55 (65%)
OAR 876..892 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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