DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OTX1 and Vsx1

DIOPT Version :10

Sequence 1:NP_055377.1 Gene:OTX1 / 5013 HGNCID:8521 Length:354 Species:Homo sapiens
Sequence 2:NP_572232.2 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster


Alignment Length:393 Identity:102/393 - (25%)
Similarity:140/393 - (35%) Gaps:114/393 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    15 LGLAGPAMD-------------LLHPSVGYPATPRKQRRE--RTTFTRSQLDVLEALFAKTRYPD 64
            ||.||.|..             |:.|....|...:|.:|.  ||.||.|||:.||..|.:..|||
  Fly   357 LGAAGGAGGNPNSLLAAHGGDVLVGPGGTGPGGKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPD 421

Human    65 IFMREEVALKINLPESRVQVWFKNRRAKCRQQQQS-GSGTKS---------------------RP 107
            :..||.:::|..|.|.|:|||::|||||.|:.::. |..||.                     :.
  Fly   422 VSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGAMVRHSLPLPETIIKS 486

Human   108 AK-------------KKSSPVRESSGSESSGQFTPPA----VSSSASSSSSASSSSAN------- 148
            ||             |||....|...|:.|.:.||.:    .|.||.|:.::..||.:       
  Fly   487 AKEDESVAPWLLGMHKKSLEAAELLKSDESDRETPTSDDTNTSYSAGSTHNSPISSFSISRLLFD 551

Human   149 ---PAAAAAAGLG---------GNPVAAASSLSTPAASSIWSPASISPGSAPASVSVPEPLAAPS 201
               |||.:|.|.|         |:..|...:.:...|..:..... ..............|.|..
  Fly   552 APPPAAGSAGGKGHHHHHHHHKGHHHAHVHAQAQAHAHMLLHHQQ-QQQQQQQQQQHHHHLHAAE 615

Human   202 NTSCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPTPSSSYFGGVDCSSYLAPMHSHH----HPH 262
            |:  :|:...||..:.:.|     |.|...|.|...|.:.:       .|....|.||    ...
  Fly   616 NS--LQQQQVAGTGSGSGS-----GSGSGTGAGSTGPPAHH-------PYNQQQHLHHLQQLQQQ 666

Human   263 QLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHHHHQGYGGSGLAFNSADCLDYKEPGAAAA 327
            |......:.....||||.|          ||..||.|||....|            |.|...|||
  Fly   667 QQQQQQQAQQQQQHHHHQH----------HHSVHHMHHHNAAAG------------YAEAAVAAA 709

Human   328 SSA 330
            ::|
  Fly   710 AAA 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OTX1NP_055377.1 Homeodomain 39..95 CDD:459649 28/57 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..146 20/93 (22%)
TF_Otx 178..274 CDD:427350 17/99 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..305 15/51 (29%)
Vsx1NP_572232.2 Homeodomain 395..452 CDD:459649 28/56 (50%)

Return to query results.
Submit another query.