DRSC/TRiP Functional Genomics Resources

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Protein Alignment OTX1 and Vsx2

DIOPT Version :10

Sequence 1:NP_055377.1 Gene:OTX1 / 5013 HGNCID:8521 Length:354 Species:Homo sapiens
Sequence 2:NP_001284897.1 Gene:Vsx2 / 31469 FlyBaseID:FBgn0263512 Length:645 Species:Drosophila melanogaster


Alignment Length:354 Identity:101/354 - (28%)
Similarity:144/354 - (40%) Gaps:79/354 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    10 YGM---NGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEV 71
            :||   ||.|: ||         ......:|:|..||.||..||:.||..|.:..|||::.||.:
  Fly   209 FGMESLNGFGV-GP---------NSKKKKKKRRHSRTIFTSYQLEKLEEAFKEAHYPDVYAREML 263

Human    72 ALKINLPESRVQVWFKNRRAKCRQQQQSGSG----------------------TKSRPAKKKSSP 114
            :||..|||.|:||||:|||||.|:.::...|                      |..:.||...:.
  Fly   264 SLKTELPEDRIQVWFQNRRAKWRKTEKVWGGSTIMAEYGLYGAMVRHSLPLPDTILKSAKDNDAV 328

Human   115 VRESSGSESSGQFTPPAVSSSASSSSSASS---SSANPAAAAAAGLGGNPVAAASSLSTPAASSI 176
            .....|.|..........:.||....|..|   .||...:|.:..|..:...|.|| ||.:.:.:
  Fly   329 APWLLGMEQKCMHRKSIEAQSALKDDSGVSDHEDSAGSKSAHSEDLSRSRCHALSS-STESLNVV 392

Human   177 WSPASISPGSAPASVSVPEPLAAPSNTSCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPTPSSS 241
             |||   |.|.|.|.|...|   |::||..     ||||::||:.|          .|..|.:||
  Fly   393 -SPA---PSSCPTSASTSAP---PTSTSGY-----AGAASSAATTP----------TGASTTNSS 435

Human   242 YFGGVDCSSYLAPMHSHHHPHQLSPMAPSSM---AGH--HHHHPHAHHPLSQSSGHHHHHHHHHH 301
            ....::..| .:|....|...|......:|:   ||.  ....|.::|||..::           
  Fly   436 SSPHIELGS-PSPQQQQHLQLQQQQQQQASLYLGAGAVVTGCAPPSYHPLLDAA----------- 488

Human   302 QGYGGSGLAFNSADCLDYKEPGAAAASSA 330
             ...|:|.|.:|.|.........|||::|
  Fly   489 -NAAGAGAAASSKDFHMIMNTAVAAAAAA 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OTX1NP_055377.1 Homeodomain 39..95 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..146 13/79 (16%)
TF_Otx 178..274 CDD:427350 28/98 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..305 9/52 (17%)
Vsx2NP_001284897.1 Homeodomain 230..287 CDD:459649 30/56 (54%)
OAR 556..572 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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