DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH5 and ca4b

DIOPT Version :10

Sequence 1:NP_001097988.2 Gene:CAH5 / 50102 FlyBaseID:FBgn0040629 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001159683.1 Gene:ca4b / 553246 ZFINID:ZDB-GENE-080815-5 Length:304 Species:Danio rerio


Alignment Length:276 Identity:91/276 - (32%)
Similarity:139/276 - (50%) Gaps:30/276 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 AAGEYNYDEQ----------GDDW-TGTCQSGEN-QSPIDLIFE----DSKIVAIPRLRFNNYDQ 87
            ::.|:.|..|          .||| |.....|.| ||||:::..    ||::..:   :|.:|.:
Zfish    17 SSAEWCYQTQVTCSNHSCIGPDDWATVAAACGNNKQSPINIVTNKASTDSRLTPV---QFTDYQE 78

  Fly    88 PLQTPLVITNNGHTANMVIPQTRGGQRPSINGSLLPGNFEAQSVHFHWGSREAKGSEHAINFQRY 152
            .|..  ||.|||||..:.:|     .|..|||:.|...::||.:|.|||.....||||.|:.:::
Zfish    79 RLNA--VIVNNGHTVQINLP-----DRAKINGANLGSTYKAQQLHLHWGKNGGPGSEHTIDGEKF 136

  Fly   153 DVEMHIVHKNTIYETMGEATMHPDGLAVLGVMFRAVDRQTSQHYGLNKIFNQLPRIVQYNSNATI 217
            .:|:|:||....|.::.:|.....|:||||..:...:.....:   :.|.|.|..|....|||.:
Zfish   137 PMELHVVHIKEEYNSLEQAVGDSSGVAVLGFFYEESENANKNY---DAIINSLTNITHPESNAEL 198

  Fly   218 TGRLTVGQLLGNIVTGEFFTYNGSLTTPDCAEAVTWTVFPDVLDYPRRQITKLWNLRDSRQRPLI 282
             |.:::..|:.|....::|.|.||||||.|||||.||:|...:...:.|::...||..|....::
Zfish   199 -GAISLDMLIPNEDLDKYFRYEGSLTTPGCAEAVVWTIFEKTIPLSKEQLSAFSNLTFSDGAAMV 262

  Fly   283 NNYRSIQDTNSRDVYY 298
            |.:|.||....|.|||
Zfish   263 NTFRPIQLRFDRPVYY 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH5NP_001097988.2 Carb_anhydrase 50..299 CDD:459707 88/255 (35%)
ca4bNP_001159683.1 alpha_CA_IV_XV_like 50..278 CDD:239391 81/241 (34%)

Return to query results.
Submit another query.