DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH5 and cah-2

DIOPT Version :10

Sequence 1:NP_001097988.2 Gene:CAH5 / 50102 FlyBaseID:FBgn0040629 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_495567.3 Gene:cah-2 / 174218 WormBaseID:WBGene00000280 Length:337 Species:Caenorhabditis elegans


Alignment Length:266 Identity:63/266 - (23%)
Similarity:114/266 - (42%) Gaps:45/266 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 DWTGTCQSGENQSPIDLIFEDSKIVAIPRLRFNNYDQPLQTPLVITNNGHTANMVIPQTRGGQRP 115
            ||. .|.:|:.|||:::  :.|:::..|.|...|.:..: ...|..|.|....:.:...  ..||
 Worm    26 DWR-MCTAGQMQSPVNI--DPSQLLYDPHLMPINIEGNI-VEAVFENTGQLPVVTVKDL--PNRP 84

  Fly   116 SIN---GSLLPGNFEAQSVHFHWGSRE--AKGSEHAINFQRYDVEMHIV-HKNTIYETMGEATMH 174
            :||   |..:|..::...:..|:|..:  .|||||.::..|:..|:.:: :.:.:|.....|...
 Worm    85 TINITGGPTMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEIQLLAYNSALYPNFSVAMTS 149

  Fly   175 PDGLAVLGVMFRAVDRQTSQHYGLNKIFNQLPRIVQYNSNATITGRLTVGQLLGNIV-------- 231
            |.||..:.|:. .:.:.||.         :|.|:...:.:....|:.|      |:.        
 Worm   150 PRGLLAVSVIV-DIGKTTSV---------ELRRLTVASQSINYKGQTT------NLTDFQPSALL 198

  Fly   232 --TGEFFTYNGSLTTPDCAEAVTWTVFPDVLDYPRRQITKLWN--LRDSRQRP----LINNYRSI 288
              |..:.||.||||.|.|.|.|||.:..:.: |......::||  .:...::|    :...||.:
 Worm   199 PKTSHYVTYEGSLTFPGCHETVTWVILNNPI-YITNDDLQIWNEMQKTETKQPEPSYMTPAYRPL 262

  Fly   289 QDTNSR 294
            :..|.|
 Worm   263 KSLNGR 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH5NP_001097988.2 Carb_anhydrase 50..299 CDD:459707 63/266 (24%)
cah-2NP_495567.3 alpha_CARP_X_XI_like 16..275 CDD:239395 63/266 (24%)

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