DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH5 and ca11

DIOPT Version :10

Sequence 1:NP_001097988.2 Gene:CAH5 / 50102 FlyBaseID:FBgn0040629 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_002938168.2 Gene:ca11 / 100493884 XenbaseID:XB-GENE-6037596 Length:330 Species:Xenopus tropicalis


Alignment Length:253 Identity:75/253 - (29%)
Similarity:120/253 - (47%) Gaps:41/253 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 CQSGENQSPIDLIFEDSKIVAIPRLRFNNYDQPLQTPLVITNNGHTANMVIPQTRGGQRPS---- 116
            |..|:.||||::  ..|:|:         :| |...||.::..|.|.:..:..|  |:..|    
 Frog    61 CTIGKRQSPINI--NTSQII---------FD-PFLPPLRLSMTGTTVSGTMHNT--GRHVSFRLD 111

  Fly   117 ------INGSLLPGNFEAQSVHFHWGSREAKGSEHAINFQRYDVEMHIVHKN-TIYETMGEATMH 174
                  |:|..|..|...:.|..|:||..:.||||.:|.:....|:.::|.| .:|..:.||:.:
 Frog   112 KEQPVNISGGPLLYNHRLEEVMLHFGSENSIGSEHLMNKETSAGEVQLIHYNQDLYSNVTEASRN 176

  Fly   175 PDGLAVLGVMFRAVDRQTSQHYGLNKIFNQ--LPRIVQYNSNATITGRLTVGQLLGNIVTGEFFT 237
            |:||||:.:.....|...|   .||::.|:  :.|| .:.:.||....|::..|..:  |..|.|
 Frog   177 PNGLAVISLFLNVADNSNS---FLNRMLNRETITRI-SFRNEATYIQDLSIEDLYPD--TFGFLT 235

  Fly   238 YNGSLTTPDCAEAVTWTVFPDVLDYPRRQITKLWNLRDSRQRP------LINNYRSIQ 289
            |.||:|.|.|.|.|||.|....|:....|:..|..|  |:.:|      :.:|:|.:|
 Frog   236 YQGSMTIPPCYETVTWIVIDRPLNITSMQMHSLRLL--SQNQPSQIFQSMSDNFRPVQ 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH5NP_001097988.2 Carb_anhydrase 50..299 CDD:459707 75/253 (30%)
ca11XP_002938168.2 alpha_CARP_X_XI_like 47..303 CDD:239395 75/253 (30%)

Return to query results.
Submit another query.