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Protein Alignment CAH16 and Car15

DIOPT Version :9

Sequence 1:	NP_001287620.1	Gene:	CAH16 / 50101	FlyBaseID:	FBgn0040628	Length:	286	Species:	Drosophila melanogaster
Sequence 2:	NP_085035.1	Gene:	Car15 / 80733	MGIID:	1931324	Length:	324	Species:	Mus musculus

Alignment Length:	296	Identity:	86/296 - (29%)
Similarity:	141/296 - (47%)	Gaps:	24/296 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MQAIAFHKLLLLLPLAFYQSTNGMEWNYLKNGKD-------WEDLCSS--GKHQSPILLDSR-TA 55
            |.|:.|....||:.||....::| .|.|  :.:|       |::|..:  |..||||.:|.| ..
Mouse     1 MWALDFLLSFLLIQLAAQVDSSG-TWCY--DSQDPKCGPAHWKELAPACGGPTQSPINIDLRLVQ 62

  Fly    56 RKWVLPGITFWHYYRLLKRPFYIRNNGHSISLDIPVTSNGRKPFITGGRLKG-RYYADGLHFHWG 119
            |.:.|....|..|....:.|:.:.|:||::.|.:. :.....|.|.|..|.. .|....||||||
Mouse    63 RDYTLKPFIFQGYDSAPQDPWVLENDGHTVLLRVN-SCQQNCPAIRGAGLPSPEYRLLQLHFHWG 126

  Fly   120 SYKSRGSEHLINKRRFDAEIHIVHRNEKYRNIAQAVRQKDGLAVVAIMVAIVRKDNAKSTPLSRL 184
            |...:||||.::::....|:|:||.|.||:::..|..|.||.|::|:::....:||...:.:...
Mouse   127 SPGHQGSEHSLDEKHGSMEMHMVHMNTKYQSMEDARSQPDGFAILAVLLVEEDRDNTNFSAIVSG 191

  Fly   185 MEAVVRVPIEDSNATVFGQSSLDQLIGGVSHRDFFTYEGSLTTPLCDETVTWIVFTETTTVTMSS 249
            ::.:....:..:..:.|..:||  |...:....::.|.||||||.|:..|.|.||..|..:..:.
Mouse   192 LKNLSSPGVAVNLTSTFALASL--LPSALRLLRYYRYSGSLTTPGCEPAVLWTVFENTVPIGHAQ 254

  Fly   250 VSKFWLLRD------HWGHRLINNYRIVQDLNNRTV 279
            |.:|..:..      | ...|.:|:|..|.|..|.:
Mouse   255 VVQFQAVLQTGPPGLH-PRPLTSNFRPQQPLGGRRI 289

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.