DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH16 and Ca8

DIOPT Version :10

Sequence 1:NP_001287620.1 Gene:CAH16 / 50101 FlyBaseID:FBgn0040628 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_001009662.1 Gene:Ca8 / 297814 RGDID:1304709 Length:290 Species:Rattus norvegicus


Alignment Length:282 Identity:86/282 - (30%)
Similarity:145/282 - (51%) Gaps:39/282 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QSTNGMEWNYLKNGKDW----EDLCSSGKHQSPILLDSRTAR-KWVLPGITFWHYYRLLKRPFYI 78
            :...|:||.| :.|.:|    .|  ::|::||||.|:||.|| ...|..:.....| ::.|...:
  Rat    22 EEEEGVEWGY-EEGVEWGLVFPD--ANGEYQSPINLNSREARYDPSLLDVRLSPNY-VVCRDCEV 82

  Fly    79 RNNGHSISLDIPVTSNGRKPFITGGRL-KGR-YYADGLHFHWGSYKSRGSEHLINKRRFDAEIHI 141
            .|:||:|.:.:.     .|..::||.| :|: :....:.||||....|||||.:|.:.|..|:|:
  Rat    83 TNDGHTIQVILK-----SKSVLSGGPLPQGQEFELYEVRFHWGRENQRGSEHTVNFKAFPMELHL 142

  Fly   142 VHRNEK-YRNIAQAVRQKDGLAVVAIMVAIVRKDNAKSTPLSRLMEAVVRVPIEDSNATV--FGQ 203
            :|.|.. :.:|.:||.:..|:.::|:.|.|    ..:...|..:.|.:..:..:..:.|:  |..
  Rat   143 IHWNSTLFGSIDEAVGKPHGIVIIALFVQI----GKEHVGLKAVTEILQDIQYKGKSKTIPCFNP 203

  Fly   204 SSL--DQLIGGVSHRDFFTYEGSLTTPLCDETVTWIVFTETTTVTMSSVSKFWLLRDH-WGHRLI 265
            ::|  |.|:     ||::.||||||.|.|.|.||||:|....|::...:.:|..||.| .|..|:
  Rat   204 NTLLPDPLL-----RDYWVYEGSLTIPPCSEGVTWILFRYPLTISQLQIEEFRRLRTHVKGAELV 263

  Fly   266 --------NNYRIVQDLNNRTV 279
                    :|:|..|.|::|.:
  Rat   264 EGCDGILGDNFRPTQPLSDRVI 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH16NP_001287620.1 Carb_anhydrase 33..281 CDD:459707 81/268 (30%)
Ca8NP_001009662.1 alpha_CARP_VIII 35..289 CDD:239394 81/268 (30%)

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