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Protein Alignment CAH16 and Car3

DIOPT Version :9

Sequence 1:	NP_001287620.1	Gene:	CAH16 / 50101	FlyBaseID:	FBgn0040628	Length:	286	Species:	Drosophila melanogaster
Sequence 2:	NP_031632.2	Gene:	Car3 / 12350	MGIID:	88270	Length:	260	Species:	Mus musculus

Alignment Length:	268	Identity:	84/268 - (31%)
Similarity:	128/268 - (47%)	Gaps:	29/268 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 EWNYLK-NGKD-WEDL--CSSGKHQSPILLDSRTARKWVLPGITFWHYYRLLKRPFYIRNNGHSI 85
            ||.|.. ||.| |.:|  .:.|.:||||.|.::..:.  .|.:..|...........|.|||.:.
Mouse     4 EWGYASHNGPDHWHELYPIAKGDNQSPIELHTKDIKH--DPSLQPWSASYDPGSAKTILNNGKTC 66

  Fly    86 SLDIPVTSNGRKPFITGGRLKGRYYADGLHFHWGSYKSRGSEHLINKRRFDAEIHIVHRNEKYRN 150
            .:....|.:  :..:.||.|.|.|.....|.||||....||||.::..::.||:|:||.|.||..
Mouse    67 RVVFDDTYD--RSMLRGGPLSGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPKYNT 129

  Fly   151 IAQAVRQKDGLAVVAIMVAIVRKDNAKSTPLSRLMEAVVRVPIEDSNA--TVFGQSSLDQLIGGV 213
            ..:|::|.||:|||.|.:.|.|:..    ....|::|:.::..:...|  |.|..|.|..
Mouse   130 FGEALKQPDGIAVVGIFLKIGREKG----EFQILLDALDKIKTKGKEAPFTHFDPSCLFP----- 185

  Fly   214 SHRDFFTYEGSLTTPLCDETVTWIVFTETTTVTMSSVSKFWLLRDHWGHR-------LINNYRIV 271
            :.||::||.||.|||.|:|.:.|::..|..||:...::|   ||..:...       |:.|:|..
Mouse   186 ACRDYWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAK---LRSLFSSAENEPPVPLVGNWRPP 247

  Fly   272 QDLNNRTV 279
            |.:..|.|
Mouse   248 QPVKGRVV 255

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.