DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH16 and ca4.2

DIOPT Version :9

Sequence 1:NP_001287620.1 Gene:CAH16 / 50101 FlyBaseID:FBgn0040628 Length:286 Species:Drosophila melanogaster
Sequence 2:XP_002933882.2 Gene:ca4.2 / 100489625 XenbaseID:XB-GENE-5952677 Length:302 Species:Xenopus tropicalis


Alignment Length:295 Identity:86/295 - (29%)
Similarity:138/295 - (46%) Gaps:49/295 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLLLPLAFYQSTNGME--WNYLKNG--------KDWED---LCSSGKHQSPILLDSRTA--RKW 58
            |.||:.|:..:.:...|  |.|...|        :.|.:   .|:. .|||||.:.::.|  .|.
 Frog     7 LALLVSLSLIKDSAAAEGDWCYEIQGHQTLGCGPRFWGEHYPTCAK-NHQSPINVLTKKAVFDKA 70

  Fly    59 VLPGITFWHY--YRLLKRPFYIRNNGHSISLDIPVTSNGRKPFITGGRLKGRYYADGLHFHWGSY 121
            :.|    :|:  |.:..|...|.|||||..:|:|....     |:||.|...|.|...||||||.
 Frog    71 LKP----FHFKGYNITGRHLNITNNGHSAQVDLPTGIE-----ISGGGLSETYIAAQFHFHWGSD 126

  Fly   122 KSRGSEHLINKRRFDAEIHIVHRNEKYRNIAQAVRQKDGLAVVAIMVAIVRKDNAKSTPLSRLME 186
            :..||||.::..::..|:||||:.:         ....|...:|::.....:....:|..:.|:|
 Frog   127 EFYGSEHTVDGEKYPMELHIVHKRK---------TSTGGFGDLAVLGFFYEETAKNNTEYNSLIE 182

  Fly   187 AVVRVPIEDSNATVFGQSSLDQLIGGVSHRDFFTYEGSLTTPLCDETVTWIVFTETTTVTMSSVS 251
            ::..:..:|.....  .::||:||.....:.::.|.||||||.|:|||.|.:|  .||:   .:|
 Frog   183 SLGHISTKDGYKNF--SATLDKLIPINELKVYYRYNGSLTTPPCNETVIWTLF--NTTI---KLS 240

  Fly   252 KFWLLRDHWG------HRLINNYRIVQDLNNRTVF 280
            |..|...|..      .|::.|:|.||..::|.|:
 Frog   241 KLQLQAFHNSLNFTEKQRMVENFRPVQKRSDRIVY 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH16NP_001287620.1 Carb_anhydrase 26..278 CDD:215000 79/272 (29%)
ca4.2XP_002933882.2 alpha_CA_IV_XV_like 52..275 CDD:239391 75/248 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I4958
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I4459
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18952
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.160

Return to query results.
Submit another query.