DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13643 and thw

DIOPT Version :9

Sequence 1:NP_001262937.1 Gene:CG13643 / 50074 FlyBaseID:FBgn0040601 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001097699.2 Gene:thw / 40868 FlyBaseID:FBgn0037487 Length:1137 Species:Drosophila melanogaster


Alignment Length:982 Identity:204/982 - (20%)
Similarity:313/982 - (31%) Gaps:337/982 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ATTLCSGY-GYAQAQLLDEDDDL-----AFGRP---WPTYSLQNMPKTQFTCHDKILGGYYADPE 69
            |.|.|:.: .:.:.:..|||.|.     ..|||   :|.|  ..:|||.|:|. ....||:||.|
  Fly    63 AHTNCNEHKHHLKKRASDEDVDYEVYQGVVGRPGIDFPIY--PRIPKTSFSCR-SYGNGYFADME 124

  Fly    70 TQCQMFHVCVKLPGVGLLHRRANPFVQQVQDYRFLCPNTTAFDQELQICANWLDVDCDKATSFYD 134
            |.||:||:|                 ::.:...|||||.|.|.|....|..|..|:|..::.:| 
  Fly   125 TDCQVFHIC-----------------EEGRKISFLCPNGTIFQQSELTCDWWFKVNCLGSSGYY- 171

  Fly   135 NGHLNDLYRNGDESKSANEEEATFHLQRAETGDIRRSKENHNNNNINNNRGADQKPRHRHNYAQT 199
                               .|:...|.:.....:|.|......|.:..  |.:.||:.. ..|..
  Fly   172 -------------------AESAEILNKQRVHRVRPSVPVQGFNIVGG--GLNIKPKVT-PVAGQ 214

  Fly   200 GGSSSSSSSPKLEITQSTKRPISTYYTPTTLGSTTTSTTSTTTTTERSYYNNNYNNNYSNNDDSK 264
            |.|::..::|       .:|..||...|.::.|......|  ...:|....:..||   :||...
  Fly   215 GRSAAPRANP-------DRRIDSTEDVPASVESVDFDDVS--GEKQRKVLPSIDNN---SNDQES 267

  Fly   265 QDLDDIFKGSHSSHFFSNRHGGREYDEEPSRPKPND----FSDYQRKTTRVTPTRGV-------- 317
            |..      :.||.|.|.  .|:....:.|.|..||    ....:.:|...|..|||        
  Fly   268 QIT------AESSSFVSG--SGKRRTNKESNPNRNDDITVLKPARLRTPVATQERGVSTERARNG 324

  Fly   318 -----------------QRPTSGSSSPIPSSTAAPSTTKSLKKITLH-----------------A 348
                             :|||.|.|...|....|.| |:|:.:.|.|                 .
  Fly   325 QRGQHRYSGSEEHSKERERPTPGQSKEKPEFFEAHS-TRSVPQTTAHYSTGSHSTVRRLEPSKST 388

  Fly   349 TFNTDFLDSSSHTKSP----SY----SAVTTPRPSSSITSRFSFGSN----DFSTQERIQPT--- 398
            .|.|..:.|...:||.    :|    ...|||.|     .||...|:    :.|...:::||   
  Fly   389 PFYTPTVPSLVKSKSTEGKLNYIKGGHVATTPNP-----HRFGSASSGIFIESSVAPKVKPTASA 448

  Fly   399 ------TYNP------------NNGAYRFKTTSPPASSTKVTGKGVQDFEKRSKPTSAAVRKQKL 445
                  |:.|            ::|.:|     ||:.||:     .:|:    .||:.:......
  Fly   449 SIELDSTFKPVIIGMRHHYDVASSGEFR-----PPSKSTE-----SRDY----LPTTPSPSAASS 499

  Fly   446 GP-------------------------------QESNFINQNEFVDLSKSTKLQQPQ-------- 471
            ||                               :||.|.|..   |:.|:..|.:.|        
  Fly   500 GPTYLPMSGKSPRVNTGGAAGEDVLLFAPNPVKEESVFRNVQ---DMLKTMNLLKDQFEDVELNA 561

  Fly   472 ----PFQVAQTKPNQLEP---------HYQRHKPQV------------------TRVGGQEPAPF 505
                |.:|....|....|         ..|.|...:                  |::..:.|.|.
  Fly   562 AAAAPARVGLEIPPSSGPDALVSFAKYFAQEHNETINSLSKKDKSEKVDKTGVQTKLSVKPPLPT 626

  Fly   506 SAPSSKPRSFTS--------------RGSITYKATTERY------------------VDQELYYP 538
            ..||......|:              :.|:....|.::|                  :...|...
  Fly   627 IKPSDTTALLTTSENPPAISDNADDIKKSLLSDTTVKKYSNLFGLKSAQGRGAGESDISSGLLSN 691

  Fly   539 TTSST-TRAKEAY--------TPTTF-----RPTTYKKPYEQSYQ---SQQTHRPTQAATKKAAH 586
            .|:.| :.|...|        |.:|.     :|.|.|  ..|.:.   |.....|.....:.||.
  Fly   692 QTNGTQSEAGSKYQQYPQIGSTGSTIGALAEKPETRK--IAQIFSNALSSYLDNPATFRAELAAR 754

  Fly   587 SVTSAPPTTTN--PHANVDEDDGQYHPELYENDFPRNRIRFLRNRSTSSTTSTTSAPVVSSRQPH 649
            :..:.||:|.|  |....|       |.|:.:...:   .:|..:.....|:.|...:.:... |
  Fly   755 ARPTEPPSTPNFKPVTTTD-------PSLFSDGTAK---YYLPTKGLPDATTPTPNSIAAEIN-H 808

  Fly   650 GFQQAHHHLKSQQQSVYQKERERERERERESDLSDED---ELFKTAQSLNFGAASINKLRADIYK 711
            .|........|....:|:....|..|...|.....:|   |..:..|:.:|     .|.|.|:.|
  Fly   809 KFDSTLAPEFSTTTELYEGSTNRGLEFSGELSPPSQDSGEEFLQQQQTQSF-----VKSRNDLLK 868

  Fly   712 AEKTSQQYNSQYSPQLASSPQASSSSS---------------SSTSTTSTTTSTTTTTTRRPPTT 761
             :...|:..:.:.|  ...|.|..|.:               ..|||:|:||||:||.:   |..
  Fly   869 -DARPQKLVTTHKP--TEHPWALKSQTDFLDPLTINDGLMKEQRTSTSSSTTSTSTTAS---PFA 927

  Fly   762 VRTTTTT 768
            .|.||.|
  Fly   928 YRVTTPT 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13643NP_001262937.1 CBM_14 63..126 CDD:279884 22/62 (35%)
thwNP_001097699.2 CBM_14 112..164 CDD:279884 23/69 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22933
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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