DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42812 and CG34428

DIOPT Version :10

Sequence 1:NP_001097901.2 Gene:CG42812 / 50072 FlyBaseID:FBgn0261994 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001097597.2 Gene:CG34428 / 5740867 FlyBaseID:FBgn0085457 Length:247 Species:Drosophila melanogaster


Alignment Length:248 Identity:59/248 - (23%)
Similarity:102/248 - (41%) Gaps:57/248 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTTCILVIFLI-------HQSSS------LLWPASSNLGLTL--SVSTPIAELYPERRILIDWCF 55
            |.:|:|...:.       ||.|.      |::|.:|...:..  .:..|:.:|..| .:...:..
  Fly     9 LVSCLLYQVMASLGSLFKHQRSKRAPIPWLIYPTTSPTRVMFIGGIGIPLEDLNYE-AVTTGYVL 72

  Fly    56 AISY---NYPYNLTEFYSIPI----WPGFANYKAKREVPQLEMTDENFYTKYGHDN-GNGMHP-- 110
            .:.|   ..|.:|....::|:    .||....:.:|: |..    |||..  |.|. |.....  
  Fly    73 KVEYWLPTTPDDLRTPTALPLTQVATPGVTGARKQRK-PMF----ENFLV--GVDELGKNTRKLL 130

  Fly   111 ----KDFSA--GELYAFLEDTLTGYGFH-ETCLLRSVCELAQHPFDDSHQHLLSDIVTFVLSP-- 166
                |..|:  ..:|..||......|:. ..|:|:|:||.|:.||..:: .|.:|::..:|:|  
  Fly   131 TRTNKVLSSYRWTVYKGLEGLADRLGYQGRICVLKSICEAAEEPFHYTN-GLFADLLHILLTPSS 194

  Fly   167 -----SQHEGFRDDEDVYRKAYELAEQDGFLGRDCLRLYSHCKHDILQLMSQV 214
                 |:|   .|:|      |..||:.|..|..|.|::..|:..:||..|::
  Fly   195 SVDKLSEH---ADNE------YYYAEKMGQSGAGCDRVFKECRRSLLQHFSEL 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42812NP_001097901.2 DM4_12 110..210 CDD:214785 31/115 (27%)
CG34428NP_001097597.2 DM4_12 139..234 CDD:214785 29/104 (28%)

Return to query results.
Submit another query.