DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42812 and CG34442

DIOPT Version :10

Sequence 1:NP_001097901.2 Gene:CG42812 / 50072 FlyBaseID:FBgn0261994 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001097311.1 Gene:CG34442 / 5740603 FlyBaseID:FBgn0085471 Length:245 Species:Drosophila melanogaster


Alignment Length:248 Identity:61/248 - (24%)
Similarity:93/248 - (37%) Gaps:69/248 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WLTTCILVIFLIHQSSSLLWPASSNLGLTLSVSTPIAELYPERRILIDWCFAISYNYPYNLTE-- 67
            :|..|.::.......|:||:..:|..|:.:::|.||.  .|.|.:.      :||||.:|..:  
  Fly    10 FLFLCAIINNFNLVKSALLFTTNSEYGIFMAISVPIG--LPHRNVF------LSYNYEFNYYQPE 66

  Fly    68 -FYSIPIWPGFANYKAKREVPQLEMTD-ENFYTKY---GHDNGNGMHPKD--------------- 112
             .|..|              |.|...| |:.|..|   |.: ..|.|.::               
  Fly    67 HVYKYP--------------PILMGQDFEDSYLTYPTTGRE-AEGRHCQNCTDWKIEGNINSTSS 116

  Fly   113 -----------------FSAGELYAFLEDTLTGYGF-HETCLLRSVCELAQHPFDDSHQHLLSDI 159
                             .|....||.|.|.|...|| .|.||||.:|:.......:.: ..|..:
  Fly   117 NNNSTKAASREKRGLTLMSRSVFYAMLRDKLRRSGFPAEPCLLRLICDTNASQLGEVN-GFLGSL 180

  Fly   160 VTFVLSPSQHEGFRDDEDVYRKAYELAEQDGFLGRDCLRLYSHCKHDILQLMS 212
            |..:.|||..:    ||.:..:.|: ||.||...::|......|.|:||.|:|
  Fly   181 VHIIFSPSSSK----DEHLPNEYYQ-AEWDGREQQECSTYTKSCDHNILDLVS 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42812NP_001097901.2 DM4_12 110..210 CDD:214785 31/132 (23%)
CG34442NP_001097311.1 DM4_12 136..219 CDD:462285 26/88 (30%)

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