DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42812 and CG17782

DIOPT Version :10

Sequence 1:NP_001097901.2 Gene:CG42812 / 50072 FlyBaseID:FBgn0261994 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_651257.1 Gene:CG17782 / 42912 FlyBaseID:FBgn0039195 Length:479 Species:Drosophila melanogaster


Alignment Length:246 Identity:47/246 - (19%)
Similarity:76/246 - (30%) Gaps:89/246 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SNLGLTLSVSTPIAELYPERRILIDWCFAISYNYPYNLTEFYSIPIW-------PGFANYKAKRE 85
            |..|::.|.|.|.|:                :..||:..:....|.|       ..:..||:::.
  Fly   254 SRPGVSSSSSNPFAK----------------WTRPYSHAQNSRYPYWALNSRLKDRYYGYKSQQA 302

  Fly    86 VPQLEMTDEN-----------------------FYTKYGH----DNGNGMHPKDFSAG------- 116
            .|......::                       .|..:|.    |..| .|.:...:|       
  Fly   303 APPAAQRRQDSTTTTSAPTTSRPTRRPAPRHHRIYPVFGKRSIPDAAN-PHKRQRRSGVATEHED 366

  Fly   117 ------------------ELYAFLEDTLTGYGFH-ETCLLRSVCELAQHPFDDSHQHLLSDIV-- 160
                              .||..:|..|...|.| ..|:||::||..|...:......:.:::  
  Fly   367 KMSRLEQLQIKHHRRSRQSLYERIEKYLDKRGHHGHHCVLRTLCETGQKSTEHEPGTFVGELMRA 431

  Fly   161 TFVLSPSQHEGFRDDEDV-YRKA-YELAEQDGFLGRDCLRLYSHCKHDILQ 209
            .|.|..:.     |:|.| ||.: |:.|...   ..||..||..||..:.|
  Fly   432 VFTLPEAM-----DNEPVAYRDSHYDKAHAS---KADCAVLYPECKQSMWQ 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42812NP_001097901.2 DM4_12 110..210 CDD:214785 29/130 (22%)
CG17782NP_651257.1 DM4_12 378..475 CDD:214785 28/105 (27%)

Return to query results.
Submit another query.