DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42812 and CG17784

DIOPT Version :10

Sequence 1:NP_001097901.2 Gene:CG42812 / 50072 FlyBaseID:FBgn0261994 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_651254.1 Gene:CG17784 / 42909 FlyBaseID:FBgn0039192 Length:237 Species:Drosophila melanogaster


Alignment Length:250 Identity:60/250 - (24%)
Similarity:92/250 - (36%) Gaps:66/250 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WLTTCILVIFLIHQ----SSSLLWPASSNLGLTLSVSTP-------IAELYPERRILIDWCFAIS 58
            ||...:.::|.|..    :.::.....|.|.::.|::.|       :..|...:|:.|       
  Fly     8 WLLFLLSLLFTIDLVLSFTKNIYTSDESFLRISRSINHPDESDNSSLTSLSRSKRVAI------- 65

  Fly    59 YN------------YPYNLTE-------FY---------SIPI-WPGFANYKAKREVPQLEMTDE 94
            ||            ||...|:       |:         :||: |..|.|..|  .|.......:
  Fly    66 YNGQGVVKLVPSLAYPVKQTDKEQSFWWFFNLQGQWIPTTIPLYWWSFWNTTA--FVSTAREWRK 128

  Fly    95 NFYTKYGHDNGNGMHPKDFSAGELYAFLEDTLTGYGFHETCLLRSVCELAQHPFDDSHQHLLSDI 159
            :...|..||............|     :|.....||  ..|||||:||::|.||.:|  ::.|:|
  Fly   129 DMQAKVLHDEARTWVYNAIEVG-----MEQLDGAYG--GVCLLRSICEISQKPFQNS--NIFSEI 184

  Fly   160 VTFVLSPSQHEGFRDDEDVYRKAYELAEQDGFLGRDCLRLYSHCKHDILQLMSQV 214
            |..||.|:.        |.....|..|...|..|.||.|.||.|...:..|::.:
  Fly   185 VNAVLVPTL--------DNVASKYLHARDAGRGGADCERTYSDCNPLLWSLVTNM 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42812NP_001097901.2 DM4_12 110..210 CDD:214785 32/99 (32%)
CG17784NP_651254.1 DM4_12 135..227 CDD:214785 34/108 (31%)

Return to query results.
Submit another query.