DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mask and pla2g6

DIOPT Version :10

Sequence 1:NP_001247280.1 Gene:mask / 50070 FlyBaseID:FBgn0043884 Length:4010 Species:Drosophila melanogaster
Sequence 2:XP_012816940.2 Gene:pla2g6 / 780118 XenbaseID:XB-GENE-920447 Length:801 Species:Xenopus tropicalis


Alignment Length:708 Identity:162/708 - (22%)
Similarity:249/708 - (35%) Gaps:188/708 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   525 NEKAPVLRHATHAID--------------ETKQALTKMRCASSPRDKNGFSRSLVAACTDNDVNT 575
            :|...:||...:|:.              ||.|.||.  |.   |....:|.:.||.    |:..
 Frog    76 SEHEALLRFQEYAVKLRPFYESSRKGLRLETIQQLTD--CI---RSHPNWSLAHVAV----DIGL 131

  Fly   576 VKRLLCKG---NVNLNDAAASTDDGESLLSMACSAGYYELAQVLLAMSAAQVEDKGQKDSTPLME 637
            .:.....|   ::|..|.    |.|.:.|.:||..|..|..|.|:....|:.:...|...|....
 Frog   132 RESFKHNGILRSLNSTDC----DGGSTPLHLACKKGDIECLQELVEECQARQDIADQNGETVYHH 192

  Fly   638 AASAGHLDIVKLL-------LNHNADVNAHCATGNTPLMFACAGGQVDVVKVLLKHGANVEEQNE 695
            ||...:..::::|       :||.::.|      ..||..||..|:.:.|..||:..|..:...:
 Frog   193 AAQQNNPRVIEILCSVPSVGINHQSNNN------EAPLHVACRMGKTESVLALLRCQARCDIIGK 251

  Fly   696 NGHTPLMEAASAGHVEVAKVLLEHGAGINTHSNEFKESALTLACYKGHLDMVRFLLQAGADQEHK 760
            :|: |:..|........|:.:|:..|. ..|:.:.:..|..:...| :.:|.|.|:|.|.....:
 Frog   252 DGY-PIHTAMKYSQNGCAEAILDVSAN-QLHAEDPRYQATPIHWAK-NAEMARLLIQRGCKVNTR 313

  Fly   761 TDEMHTALMEASMDGHVEVARLLLDSGAQVNMPTDSFESPLTLAACGGHVELATLLIERGANIEE 825
            :....|.|.........|.|.:||.:||..|...:...:||.||....|:||...|:..||::|:
 Frog   314 SKTSDTPLHIMVKRDRFEAAMVLLTNGADPNAKGEHGNTPLHLAMKKDHLELIKALMVFGADVEQ 378

  Fly   826 VNDEGYTPLMEAAREGHEEMVALLLSKGANINA---TTEETQ----------------------- 864
            .||.|.||.:.|||........:|||...|:.|   ...:||                       
 Frog   379 HNDFGETPGLIAARSSKGNNRKVLLSMLCNVGAERCLPPDTQLLPTATSPSSVPPSDRSSGIGFH 443

  Fly   865 -----ETALT---------------------LACCGGFMEVAAFLIKEGANLELGASTPLMEASQ 903
                 .|||:                     |.|..|.......||:....:|..|..|:.|.  
 Frog   444 DLVYVSTALSGMLVPQDTVDFREDGLRVKDRLLCLDGGGIRGLVLIQLLIAIEKAAGRPIREL-- 506

  Fly   904 EGHTDLVSFLLKKKANVHAETQTGD---TALTHACENGHTDAAGVLLSYGA----ELEHESEGGR 961
               .|.||           .|.||.   .|:.|          |:.:.|..    .:::|...|.
 Frog   507 ---FDWVS-----------GTSTGGILALAIVH----------GMPMEYVRCLYFRMKNEVFHGS 547

  Fly   962 TPLMKACRAGHLCTVKFLIQK-GANVNKQTTSNDHTALSLACAGGHQSVVELLLKNNADP---FH 1022
            .|.    .:|.|  .:||.:: |.|.......|....::...:..|.:  ||.|..|.||   .|
 Frog   548 RPY----ESGPL--EEFLKREFGENTKMSDVRNPKVIVTGTLSDRHPA--ELHLFRNYDPPETDH 604

  Fly  1023 KLKDNSTMLIEASKGGHTRVVELLFRYPNISPTENAA--SANVTQAAPTSNQPGPNQMRQKIMKQ 1085
            :....|.    ||           || |..:|.|...  :|..:.||||..:|         |.:
 Frog   605 EPPYKSV----AS-----------FR-PVTAPAEQLVWRAARSSGAAPTYLRP---------MGR 644

  Fly  1086 QLQHQLQQLNAPPGLHELSEAARASNQQHFHQQQFSSAGNGSSN-------IVAMGTG 1136
            .|...|  |:..|.|..::|         .||........|.:.       :|::|||
 Frog   645 FLDGGL--LSNNPTLDAMTE---------MHQYNNCLKKKGMAGQVKKLGIVVSLGTG 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maskNP_001247280.1 ANKYR 584..858 CDD:440430 75/280 (27%)
ANK repeat 596..628 CDD:293786 9/31 (29%)
ANK repeat 633..661 CDD:293786 7/34 (21%)
ANK repeat 663..694 CDD:293786 9/30 (30%)
ANK repeat 696..724 CDD:293786 6/27 (22%)
ANK repeat 730..760 CDD:293786 7/29 (24%)
ANKYR 744..1062 CDD:440430 88/382 (23%)
ANK repeat 765..794 CDD:293786 9/28 (32%)
ANK repeat 796..827 CDD:293786 11/30 (37%)
ANK repeat 829..858 CDD:293786 10/28 (36%)
ANK repeat 862..894 CDD:293786 11/80 (14%)
ANK repeat 896..923 CDD:293786 5/26 (19%)
ANK repeat 927..957 CDD:293786 5/36 (14%)
ANK repeat 959..991 CDD:293786 8/32 (25%)
ANK repeat 993..1023 CDD:293786 8/32 (25%)
ANK 2321..2349 CDD:197603
ANK repeat 2323..2352 CDD:293786
ANKYR 2336..2623 CDD:440430
ANK repeat 2354..2386 CDD:293786
ANK repeat 2390..2419 CDD:293786
ANK repeat 2421..2452 CDD:293786
ANK repeat 2456..2486 CDD:293786
ANK repeat 2492..2521 CDD:293786
ANK repeat 2523..2589 CDD:293786
ANK repeat 2560..2587 CDD:293786
ANK repeat 2591..2622 CDD:293786
KH-I_MASK 3047..3116 CDD:411832
pla2g6XP_012816940.2 ANKYR 136..403 CDD:440430 72/279 (26%)
ANK repeat 152..183 CDD:293786 9/30 (30%)
ANK repeat 185..217 CDD:293786 6/31 (19%)
ANK repeat 219..244 CDD:293786 9/30 (30%)
ANK repeat 255..283 CDD:293786 6/28 (21%)
ANK repeat 316..347 CDD:293786 9/30 (30%)
ANK repeat 349..377 CDD:293786 10/27 (37%)
ANK repeat 382..411 CDD:293786 10/28 (36%)
Pat_PNPLA9 475..788 CDD:132851 65/287 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.