DRSC/TRiP Functional Genomics Resources

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Protein Alignment mask and Ankrd42

DIOPT Version :9

Sequence 1:NP_001247280.1 Gene:mask / 50070 FlyBaseID:FBgn0043884 Length:4010 Species:Drosophila melanogaster
Sequence 2:NP_082941.2 Gene:Ankrd42 / 73845 MGIID:1921095 Length:516 Species:Mus musculus


Alignment Length:498 Identity:116/498 - (23%)
Similarity:193/498 - (38%) Gaps:142/498 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  2316 SETESNHDTALTLACAGGHEELVELLINRGANIEHRDKKGFTPLILAATAGHDKVVDILLKHSAE 2380
            ::|.:...||..:|...|.:..::.||..|||:..:|.:|.|||.||||.||...:.|:|:...:
Mouse    87 TQTTTRGWTAAHIAAIRGQDACLQALIINGANLATQDDRGCTPLHLAATHGHSFSLQIMLRSGVD 151

  Fly  2381 LEAQSERTKDTPLSLACSGGRYEVVELLLSVGANKEHRNVSDYTPLSLAASGGYVNIIKLLLSHG 2445
             .:.:::.:..|:..|...||...::||:..|...|..:.:...|:.|||..|:::.:|.|||. 
Mouse   152 -PSVTDKREWKPVHYASFHGRLGCLQLLVKWGCGIEDVDYNGNLPVHLAAMEGHLHCLKFLLSR- 214

  Fly  2446 AEINSRTGSKLGISPLMLAAMNGHTPAVKLLLDQGSDI-----------------NAQIETNR-- 2491
                                ||..|.|:|...|.|.::                 .||.|.:.  
Mouse   215 --------------------MNSATQALKAFNDNGENVLDLAQRFLKQNVVEFIQGAQYEGSHPD 259

  Fly  2492 ---NTALT--LACFQGRHEVVSLLL-DRRANVEHRAKTGLTPLMEAASGGYIEVGRVLLDKGADV 2550
               :.|..  :|.|:|..||:..|: |...|:..|...|.||:.:||..|:|:..:.|::.||:.
Mouse   260 DHDDLAFPGHVAAFKGDLEVLKKLIGDGVINLNERDDNGSTPMHKAAGQGHIDCLQWLIEMGAES 324

  Fly  2551 NAAPVPTSRDTALTIAADKGHQKFVELLLSRNASVEVKNKKGNSPLWLAAHGGHLSVVELLY--- 2612
            |                                   :.||.|.:|..:|....||:.|:||.   
Mouse   325 N-----------------------------------ITNKAGETPSDVAKRFAHLAAVKLLEGLQ 354

  Fly  2613 -----DHNADID------------SQDNRRVSCLMA-----AFRKGHTKIVKWMVQYVSQFPSDQ 2655
                 |..:|.|            |.|.:...||..     |..:.|.|||: :.|.:....|: 
Mouse   355 KYEIDDIESDKDHINFFTRHGVEGSTDAKDDLCLSESDKANARMRAHKKIVE-LRQLLEIAESN- 417

  Fly  2656 EMIRFIGTISDKELIDKCFDCMKILRSAKEAQAVKANKNASILLEELDLERTREESRKAAAARRR 2720
              .:.:|.|::::|..|             .:.:::.|..:.|..:|..||.|.|..:......|
Mouse   418 --FKHLGGITEEDLKQK-------------KEQLESKKTINELQGQLAYERLRREKLECQLDEYR 467

  Fly  2721 ERKKKKK------------------MEKKEEKRRQQQGNGPGG 2745
            ....:.|                  .|..:||||.::...|||
Mouse   468 VEVDQLKETLQKIQVTSVAAMEDDSCESSKEKRRVKKKVSPGG 510

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
maskNP_001247280.1 ANK 555..684 CDD:238125
Ank_2 564..659 CDD:289560
ANK repeat 596..628 CDD:293786
ANK 633..751 CDD:238125
ANK repeat 633..661 CDD:293786
Ank_2 635..724 CDD:289560
ANK repeat 663..694 CDD:293786
ANK repeat 696..724 CDD:293786
Ank_5 716..771 CDD:290568
ANK 726..850 CDD:238125
ANK repeat 730..760 CDD:293786
ANK repeat 765..794 CDD:293786
Ank_2 768..859 CDD:289560
ANK repeat 796..827 CDD:293786
ANK repeat 829..858 CDD:293786
ANK repeat 862..894 CDD:293786
ANK 896..1014 CDD:238125
ANK repeat 896..923 CDD:293786
Ank_2 898..989 CDD:289560
ANK repeat 927..957 CDD:293786
ANK repeat 959..991 CDD:293786
ANK 989..>1049 CDD:238125
ANK repeat 993..1023 CDD:293786
Ank_4 995..1046 CDD:290365
ANK 2321..2349 CDD:197603 9/27 (33%)
ANK repeat 2323..2352 CDD:293786 9/28 (32%)
Ank_2 2326..2419 CDD:289560 28/92 (30%)
ANK 2350..2477 CDD:238125 35/126 (28%)
ANK repeat 2354..2386 CDD:293786 12/31 (39%)
ANK repeat 2390..2419 CDD:293786 8/28 (29%)
Ank_2 2393..2486 CDD:289560 23/109 (21%)
ANK repeat 2421..2452 CDD:293786 9/30 (30%)
ANK repeat 2456..2486 CDD:293786 7/46 (15%)
ANK 2457..2579 CDD:238125 31/146 (21%)
Ank_2 2461..2552 CDD:289560 30/115 (26%)
ANK repeat 2492..2521 CDD:293786 9/31 (29%)
ANK 2519..2645 CDD:238125 34/150 (23%)
ANK repeat 2523..2589 CDD:293786 11/65 (17%)
Ank_2 2528..2622 CDD:289560 22/113 (19%)
ANK repeat 2560..2587 CDD:293786 0/26 (0%)
ANK repeat 2591..2622 CDD:293786 12/50 (24%)
KH-I 3049..3110 CDD:238053
Ankrd42NP_082941.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
ANK 1 25..54
Ank_4 26..80 CDD:290365
ANK 27..146 CDD:238125 22/58 (38%)
ANK repeat 27..56 CDD:293786
ANK repeat 59..90 CDD:293786 0/2 (0%)