DRSC/TRiP Functional Genomics Resources

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Protein Alignment mask and nfkbiaa

DIOPT Version :10

Sequence 1:NP_001247280.1 Gene:mask / 50070 FlyBaseID:FBgn0043884 Length:4010 Species:Drosophila melanogaster
Sequence 2:NP_998349.2 Gene:nfkbiaa / 406463 ZFINID:ZDB-GENE-040426-2227 Length:310 Species:Danio rerio


Alignment Length:296 Identity:62/296 - (20%)
Similarity:110/296 - (37%) Gaps:64/296 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 DADDEEIDDEDEEEDAPEVSSFLLDANNKRSSNISALLEAAANEKAPVLRHATHAIDETKQALTK 547
            |.:.:|:|.::.:....|         ::..|.:.:|.|.         .:.|..|.|..:.|| 
Zfish    13 DCNVDEMDTKNRKTQQCE---------DRVDSGVDSLKEE---------EYETREISEEMEKLT- 58

  Fly   548 MRCASSPRDKNGFSRSLVAACTDNDVNTVKRLLCKGNVNLNDAAASTDDGESLLSMAC--SAGYY 610
                                     :.::|..:|:     ..|...|:||::.|.:|.  .|..|
Zfish    59 -------------------------IASLKETICE-----PWAKVVTEDGDTYLHLAIIHEAEDY 93

  Fly   611 ELAQVLLAMSAAQVEDKGQKDSTPLMEAASAGHLDIVKLLLNHNADVNAHCATGNTPLMFACAGG 675
            .:..:....:...:..:..:..|.|..|.......:|:.||....|......:|||.|..||..|
Zfish    94 AVQIIKQCQNDPYLNRQNNQRQTALHLAVVTEQPQMVERLLKAGCDPQLVDQSGNTALHLACKQG 158

  Fly   676 QVDVVKVLLKHGANVEEQ---------NENGHTPLMEAASAGHVEVAKVLLEHGAGINTHSNEFK 731
            .:....||    ..::.|         |.:|||.|..||...::.:.:.|::.||.::.......
Zfish   159 SLACFSVL----TQIQTQHLRSILTFPNYSGHTCLHIAAINNYLSMVESLVQLGADVDAKEQCSG 219

  Fly   732 ESALTLACYKGHLDMVRFLLQAGADQEHKTDEMHTA 767
            .::|.||....:||:|..|:..|||....|...:||
Zfish   220 RTSLHLAVDLQNLDLVHTLIALGADANSLTYGGYTA 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maskNP_001247280.1 ANKYR 584..858 CDD:440430 48/195 (25%)
ANK repeat 596..628 CDD:293786 6/33 (18%)
ANK repeat 633..661 CDD:293786 7/27 (26%)
ANK repeat 663..694 CDD:293786 10/39 (26%)
ANK repeat 696..724 CDD:293786 9/27 (33%)
ANK repeat 730..760 CDD:293786 10/29 (34%)
ANKYR 744..1062 CDD:440430 10/24 (42%)
ANK repeat 765..794 CDD:293786 2/3 (67%)
ANK repeat 796..827 CDD:293786
ANK repeat 829..858 CDD:293786
ANK repeat 862..894 CDD:293786
ANK repeat 896..923 CDD:293786
ANK repeat 927..957 CDD:293786
ANK repeat 959..991 CDD:293786
ANK repeat 993..1023 CDD:293786
ANK 2321..2349 CDD:197603
ANK repeat 2323..2352 CDD:293786
ANKYR 2336..2623 CDD:440430
ANK repeat 2354..2386 CDD:293786
ANK repeat 2390..2419 CDD:293786
ANK repeat 2421..2452 CDD:293786
ANK repeat 2456..2486 CDD:293786
ANK repeat 2492..2521 CDD:293786
ANK repeat 2523..2589 CDD:293786
ANK repeat 2560..2587 CDD:293786
ANK repeat 2591..2622 CDD:293786
KH-I_MASK 3047..3116 CDD:411832
nfkbiaaNP_998349.2 ANKYR 54..278 CDD:440430 52/237 (22%)
ANK repeat 77..111 CDD:293786 6/33 (18%)
ANK repeat 115..144 CDD:293786 7/28 (25%)
ANK repeat 146..182 CDD:293786 10/39 (26%)
ANK repeat 184..214 CDD:293786 9/29 (31%)
ANK repeat 218..246 CDD:293786 10/27 (37%)
Blue background indicates that the domain is not in the aligned region.

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