DRSC/TRiP Functional Genomics Resources

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Protein Alignment mask and iPLA2-VIA

DIOPT Version :9

Sequence 1:NP_001247280.1 Gene:mask / 50070 FlyBaseID:FBgn0043884 Length:4010 Species:Drosophila melanogaster
Sequence 2:NP_729565.2 Gene:iPLA2-VIA / 39160 FlyBaseID:FBgn0036053 Length:887 Species:Drosophila melanogaster


Alignment Length:781 Identity:171/781 - (21%)
Similarity:272/781 - (34%) Gaps:225/781 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   523 AANEKAPV----LRHATHAIDETKQALTKMRCASSPRDK-NGFSRSLVAACTDNDVNTVKRLLCK 582
            ::|||..|    |:..|...:.|..:|.:........:: |.|.:.|...     |:.||...  
  Fly    57 SSNEKRAVYEIILQRPTSDSNTTSFSLYRSPVQQEAEERFNAFLQRLPVF-----VSIVKEYY-- 114

  Fly   583 GNVN-LNDAAASTDDGESLLSMACSAGYYELAQVLLAMSAAQVEDKGQKDSTPLME----AASAG 642
             ||| |..|..:..|..| .:::....|:.|...:......|..|  |.|:..||.    |...|
  Fly   115 -NVNGLQKACDALADNPS-WTLSHLIAYFNLVDYISNPKMLQCVD--QADAATLMSPFQLAIKQG 175

  Fly   643 HLDIVKLLLN----HNADVNA----HCATGNTPLMFACAGGQVDVVKVLL-KHGANVEEQNENGH 698
            |:::||.||.    .:.|:|:    |.|...|.          :::.::: |...|:...|.:|:
  Fly   176 HMEMVKALLPLSKLEHLDINSNSVFHYAASTTK----------EIINLIIDKSTVNLNHLNSDGY 230

  Fly   699 TPLMEAASAGHVEVAKVLLEHGAGINTHSNE----FKESALTLACYKGHLDMVRFLLQ---AGAD 756
            |||..|..|...|..|.||..||.:|.::.:    :|.||.|........::.:...|   .|..
  Fly   231 TPLHVACLADKPENVKALLLAGANVNLNAKDIRKVYKTSAPTTVSSFLRTNVSKLYTQDMKYGGT 295

  Fly   757 QEH---KTDEMHTALME------ASMDG----HVEVAR-------LLLDSGAQVNMPTDSFESPL 801
            ..|   ..:.:|..:||      .:.||    ||.|||       .||...|::::......:.|
  Fly   296 PLHWCSSRETLHALIMEGCDVNATNFDGRTALHVMVARNRFECVVTLLAHDAEIDVLDKDGNAAL 360

  Fly   802 TLAACGGHVELATLLIERGANIEEVNDEGYTPL----MEAAREGHEEMVALLLSKGA-------- 854
            .:|.....|.:...|:..|.:|...|.:|.||.    .:|:....:|::.:|.|.||        
  Fly   361 HIAIEKKLVPIVQCLVVFGCDINLKNKDGKTPRHMVGNDASGNKDDEILYILHSVGAKRCKDTGS 425

  Fly   855 ----------NINATTEETQET------------ALTLACCGGFMEVAAFLIKE----------- 886
                      |.|....|..|:            ..:....|||:..||..|.|           
  Fly   426 KCPPGCNAKGNYNGIPPEAPESVEQREHIEHMLATTSRQMMGGFLNAAANGILEKQQPAQKPVVV 490

  Fly   887 -------GANLE---LGASTPLMEASQ---EGHTDLVSFLLKKKANVHAETQTGDTALTHACENG 938
                   |.::.   ||..|..:.|.:   |..:|.::...:|.| |.:..|........|.|.|
  Fly   491 DTEKELKGQSIMDALLGMFTTKVNADEMKKENSSDSLASGSQKSA-VSSPEQLPSPTSPIAAEIG 554

  Fly   939 H----------TDAAG----VLLSYGAELEHESEGGRTPL--MKACRAGHLCTVKFLIQKGANVN 987
            .          .|..|    ||:....|:|..|   |||:  |....||                
  Fly   555 DKPYGRGRLLCLDGGGIRGLVLVQMLLEIEKLS---RTPIIHMFDWIAG---------------- 600

  Fly   988 KQTTSNDHTALSLACAGGHQSVVELLLK-----------NNADPFHK-LKDNSTMLIEASKGGHT 1040
              |::....||:|.|....:..:.|.|:           .|::.|.. ||||.         |..
  Fly   601 --TSTGGILALALGCGKTMRQCMGLYLRMKEQCFVGSRPYNSEFFESILKDNL---------GEF 654

  Fly  1041 RVVELLFRYPNI---------SPTENAASANVTQAA-------PTSNQ--PGPNQMRQKIMKQQL 1087
            .|:..: ::|.|         .|.:.....|.|.|:       |.:|:  |.|....|.:.:   
  Fly   655 NVMTDI-KHPKIMVTGVMADRKPVDLHLFRNYTSASDILGIVTPINNRRIPPPQPSEQLVWR--- 715

  Fly  1088 QHQLQQLNAPP------------GLHELSEAARASNQQHFHQQQFSSAGNGS-----SNIVAMGT 1135
              ..:...|.|            ||...:....|..:.|.:.....|||..|     |.::::||
  Fly   716 --AARATGAAPSYFRAFGRFLDGGLIANNPTLDAMTEIHEYNMALRSAGRESEAIPVSVVMSLGT 778

  Fly  1136 G 1136
            |
  Fly   779 G 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maskNP_001247280.1 ANK 555..684 CDD:238125 33/142 (23%)
Ank_2 564..659 CDD:289560 27/103 (26%)
ANK repeat 596..628 CDD:293786 6/31 (19%)
ANK 633..751 CDD:238125 34/134 (25%)
ANK repeat 633..661 CDD:293786 11/39 (28%)
Ank_2 635..724 CDD:289560 29/101 (29%)
ANK repeat 663..694 CDD:293786 3/31 (10%)
ANK repeat 696..724 CDD:293786 12/27 (44%)
Ank_5 716..771 CDD:290568 15/70 (21%)
ANK 726..850 CDD:238125 32/154 (21%)
ANK repeat 730..760 CDD:293786 7/35 (20%)
ANK repeat 765..794 CDD:293786 13/45 (29%)
Ank_2 768..859 CDD:289560 30/129 (23%)
ANK repeat 796..827 CDD:293786 6/30 (20%)
ANK repeat 829..858 CDD:293786 10/50 (20%)
ANK repeat 862..894 CDD:293786 11/64 (17%)
ANK 896..1014 CDD:238125 30/136 (22%)
ANK repeat 896..923 CDD:293786 7/29 (24%)
Ank_2 898..989 CDD:289560 23/109 (21%)
ANK repeat 927..957 CDD:293786 9/43 (21%)
ANK repeat 959..991 CDD:293786 6/33 (18%)
ANK 989..>1049 CDD:238125 15/71 (21%)
ANK repeat 993..1023 CDD:293786 8/40 (20%)
Ank_4 995..1046 CDD:290365 14/62 (23%)
ANK 2321..2349 CDD:197603
ANK repeat 2323..2352 CDD:293786
Ank_2 2326..2419 CDD:289560
ANK 2350..2477 CDD:238125
ANK repeat 2354..2386 CDD:293786
ANK repeat 2390..2419 CDD:293786
Ank_2 2393..2486 CDD:289560
ANK repeat 2421..2452 CDD:293786
ANK repeat 2456..2486 CDD:293786
ANK 2457..2579 CDD:238125
Ank_2 2461..2552 CDD:289560
ANK repeat 2492..2521 CDD:293786
ANK 2519..2645 CDD:238125
ANK repeat 2523..2589 CDD:293786
Ank_2 2528..2622 CDD:289560
ANK repeat 2560..2587 CDD:293786
ANK repeat 2591..2622 CDD:293786
KH-I 3049..3110 CDD:238053
iPLA2-VIANP_729565.2 ANK repeat 166..226 CDD:293786 14/69 (20%)
Ank_2 168..258 CDD:289560 28/99 (28%)
ANK 191..343 CDD:238125 38/161 (24%)
ANK repeat 228..261 CDD:293786 13/32 (41%)
ANK 291..412 CDD:238125 27/120 (23%)
ANK repeat 292..320 CDD:293786 5/27 (19%)
Ank_2 297..386 CDD:289560 20/88 (23%)
ANK repeat 322..353 CDD:293786 10/30 (33%)
ANK repeat 355..386 CDD:293786 6/30 (20%)
ANK repeat 388..417 CDD:293786 7/28 (25%)
Pat_PNPLA9 563..876 CDD:132851 53/253 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463175
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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