DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mask and LOC101732603

DIOPT Version :9

Sequence 1:NP_001247280.1 Gene:mask / 50070 FlyBaseID:FBgn0043884 Length:4010 Species:Drosophila melanogaster
Sequence 2:XP_031760115.1 Gene:LOC101732603 / 101732603 -ID:- Length:554 Species:Xenopus tropicalis


Alignment Length:451 Identity:92/451 - (20%)
Similarity:137/451 - (30%) Gaps:146/451 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   793 PTDSFESPLTLAACGGHVELATLLIERGANIEEVN-DEGYTPLMEAARE-GHEEMVALLLSKGAN 855
            |.:|..:|||..|      |:.||:..|....|.| |....|..|...| |..:...|..|.|:.
 Frog    17 PMESSAAPLTDGA------LSCLLLLGGYMKAEPNLDSAELPKPETDSESGTRDGDCLTSSDGSG 75

  Fly   856 INATTEETQETALTLACCGGFMEVAAFLIKEGANLELGASTPLMEASQEGHTDL---VSFLLKKK 917
            .  ...|.:||.                   ..|.||..|....:..::..|..   .||.||..
 Frog    76 F--ICSEDEETF-------------------SGNSELCGSQMRTDTGEKPFTCTECGKSFTLKSS 119

  Fly   918 ANVHAETQTGDTALT-HACENGHTDAAGVLLSYGAELEHE-----------SEGGRTPLMKA--- 967
            ...|.:|.||....| ..|.||.||.       |..|.|.           :|.|:|...||   
 Frog   120 LQNHKKTHTGKKHFTCTECGNGFTDK-------GKHLRHMRIHIGEKTFTCTECGKTFTRKASLQ 177

  Fly   968 ----------------CRAG-------------HL---------CTVKFLIQKGANVNKQTTSND 994
                            |..|             ||         |...|.::.....:|:..|.:
 Frog   178 NHKKIHTGKKHFTCTECGKGFTDKGKHLRHMRIHLGEKPFTCTECGKSFTLKSSLQNHKKIHSGN 242

  Fly   995 HTALSLACAGGHQSVVELL----LKNNADPF-------HKLKDNSTMLIEASKGGHTRVVELLFR 1048
            .....:.|..|.....:||    :.....||       |.:.|   ::::..|..||  :|..|.
 Frog   243 ERFPCMECGKGFTDKGKLLRHMRVHTGEKPFTCTECGKHFIDD---IMLQKHKRIHT--IENPFT 302

  Fly  1049 -------YPNISPTENAASANVTQAAPTSNQPGPNQMRQKIMKQQLQHQLQQLNAPPGLHELSEA 1106
                   :|::...:|....:..:......:.|    |....|:.|||.                
 Frog   303 CTECGKGFPHMLILQNHIKIHTGEKPFVCTECG----RCFTEKRTLQHH---------------- 347

  Fly  1107 ARASNQQHFHQQQF--SSAGNGSSNIVAMGTGDFLDAGELQLTATAGMSAGAGTSTTGSET 1165
                |:.|..::.|  :..|.|.:...::...:.:..||...|.|.     .|.|.|..:|
 Frog   348 ----NKIHTGEKPFICTECGKGFTQKTSLLNHNKIHTGEKPFTCTE-----CGRSFTEKKT 399

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
maskNP_001247280.1 ANK 555..684 CDD:238125
Ank_2 564..659 CDD:289560
ANK repeat 596..628 CDD:293786
ANK 633..751 CDD:238125
ANK repeat 633..661 CDD:293786
Ank_2 635..724 CDD:289560
ANK repeat 663..694 CDD:293786
ANK repeat 696..724 CDD:293786
Ank_5 716..771 CDD:290568
ANK 726..850 CDD:238125 18/58 (31%)
ANK repeat 730..760 CDD:293786