DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mask and Poteh

DIOPT Version :9

Sequence 1:NP_001247280.1 Gene:mask / 50070 FlyBaseID:FBgn0043884 Length:4010 Species:Drosophila melanogaster
Sequence 2:XP_006251849.1 Gene:Poteh / 100363368 RGDID:2323175 Length:1085 Species:Rattus norvegicus


Alignment Length:1446 Identity:265/1446 - (18%)
Similarity:455/1446 - (31%) Gaps:541/1446 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   834 LMEAAREGHEEMVALLLSKGANINATTEETQETALTLACCGGFMEVAAFLIKEGANLEL---GAS 895
            |..||..|....|...|:...|....|::...|||..||..|.:.|...||:...|:..   ...
  Rat    25 LHRAASVGAVATVERFLTFRLNGVNDTDKRNRTALHYACAHGHLGVVTLLIERNCNVNARDDDKC 89

  Fly   896 TPLMEASQEGHTDLVSFLLKKKANVHAETQTGDTALTHACENGHTDAAGVLLSYGAELEHESEGG 960
            |||::|||....|.|:.||:..|:.:|....|:|||.:|..:.:...|..||.:.|.:|..::.|
  Rat    90 TPLIKASQHQREDCVAVLLQHGADPNAVDALGNTALHYAVHSENASIASQLLEHSANIEARTKEG 154

  Fly   961 RTPLMKACRAGHLCTVKFLIQKGANVNKQTTSNDHTALSL---ACAGGHQSVVELLLKNNADPFH 1022
            .|||..|.:......|:.||:|||        |.||...|   :|..|            .|...
  Rat   155 FTPLSLAVQQNRGPIVELLIEKGA--------NKHTVFRLDRSSCRFG------------PDGSS 199

  Fly  1023 KLKDNSTMLIEASKGGHTRVVELLFRYPNISPTENAASANVTQAAPTSNQPGPNQMRQKIMKQQL 1087
            :.||:|.:.|:                              .:||..::.|     |||..|   
  Rat   200 RKKDDSNVDIK------------------------------DEAALKTSIP-----RQKASK--- 226

  Fly  1088 QHQLQQLNAPPGLHELSEAARASNQQHFHQQQFSSAGNGSSNIVAMGTGDFLDAGELQLTATAGM 1152
                               ||.:|.|..|                           |:.|:    
  Rat   227 -------------------ARQTNLQPDH---------------------------LRTTS---- 241

  Fly  1153 SAGAGTSTTGSETGMEEYGEVGGIDLTTLGAQQQEGLIAKSRLFHLQQQQQQQQQQQQQQQQQQQ 1217
                                                                          |:|
  Rat   242 --------------------------------------------------------------QEQ 244

  Fly  1218 QQQQQQQQQQQPPAAGQHQLVPCKHFDLDMEHINSLQPPQKAPPAPPVLFHTVCQQPVMQQQQQQ 1282
            :::::.....:|..:|                    :||.|....             .||.:|.
  Rat   245 KEKRKCDTGHRPAHSG--------------------RPPMKTAEE-------------AQQSKQL 276

  Fly  1283 LQPGQLKLKAMLPNRNRALKTAEVVEFIDCPVDQQQPGEQVRTQPLGEDGKTPQFACAGEDPRLQ 1347
            .:..:.||:..|.                 |.:::.|       |....||...   ..|:.|..
  Rat   277 TKVLRSKLRTFLE-----------------PSEKEPP-------PSISTGKAHS---KDEEERKY 314

  Fly  1348 RRRGFMPELKKGELPPESSSSDPNELALKGADNNQPVPTALDNSACAQIPARNSGGAITHSSEV- 1411
            |    :.||               ::||:.:|:......|..::|.|.:.|..|..:.:.|:.. 
  Rat   315 R----LQEL---------------DVALENSDDRTVCTVASASAAAAAVSASTSAESASTSASAA 360

  Fly  1412 --LQSTAISDRPKVKATNKNNRKQAAAAAAAAAAAAAAAAAAAQHAQQVLPNPMVSIYNNLHLQH 1474
              :.|.|.:......|    :...|.|:|:||:.:||:|:|:|..|........:|.|:      
  Rat   361 SRIASAAFASASAASA----SASVAFASASAASTSAASASASASEASAAAAAASISAYD------ 415

  Fly  1475 PHLQFQQQLQLHHQRVAGLDNAAAAAAAAASSAN------MAYSISPA-------------SPLP 1520
                            |....||||||:||:|:|      :|.:::.|             .|:|
  Rat   416 ----------------ASAAAAAAAAASAATSSNTTVNAVVAAAVTAAFVAVAATAEHKGDEPIP 464

  Fly  1521 S-PTGSGNYVDQQLQQQSMDVALQRKTAMDDFRGMLETAVNGPRGRKDLALNTPQLNFFKDGWHM 1584
            . .:|:.|         ..|..|:.|...|               :.:.|.:..::|..::    
  Rat   465 QRHSGATN---------DRDFVLKEKEEQD---------------KSEPATHLMEINRSEN---- 501

  Fly  1585 VGVHNFFGDQPKSPTETPPEMEETTMSSPTE-------ADRLGSEPRAEMKNLATLCSAAAAAAA 1642
               .|.|      |.::.|..|..|..:...       |..|..:.|...||             
  Rat   502 ---KNSF------PGDSMPTFETCTADTSAMLQVKQSCARELHQDDRRYAKN------------- 544

  Fly  1643 VAAVNKDQVEISSDLESECEDDAEGGAGADCEENTLPPEPI------------------------ 1683
               .:|::.|:     .:.::..||     .|:.|||.|..                        
  Rat   545 ---TSKEKHEV-----KKLKNFGEG-----LEDGTLPCEAASDDYRDSGCLLGLWDELYLCKRLL 596

  Fly  1684 ------------ELAAALREDGIIVEEEEDDEEEDDDDEEQDTNSGEVDKLNYD-DEDAEVDNDG 1735
                        |:.....:.|.:.:|.....|.....|.|:|..||:..|... .::..:.|||
  Rat   597 EIKNSYGDVLRREIKKMETKHGGVRKELSKITEVLSQPERQETEWGELCNLRSSLKQNENIINDG 661

  Fly  1736 EVDYIDEDEGGGEGEEEEDDAD--------DDEFFLDEPDSDQGTGNNNNNSKSGASSLPLKQRK 1792
            ..|...:.|..|...:..::..        ::||.:.:  .:...||.|.|.|:...|:      
  Rat   662 CFDGKMKTELRGRERQYHEEFGRSPLYHQCNEEFEVGQ--HEMSLGNLNMNLKALHDSV------ 718

  Fly  1793 MATRLENLILNSQTVCDFPPE---LSNSELVHVLPQIS----NLKAAANSNAALNSVLQQQLAAA 1850
              |:|:...|.     |.|..   ||::.:.|:|.::.    .|:.:..:.|.....|:.||...
  Rat   719 --TQLQEAQLQ-----DDPQREGVLSSARMAHLLWKLEVDCLKLEDSVKNQAEEIEELETQLLTV 776

  Fly  1851 SAAAAHAKASVVHQKQQHGEGDQQCE-DDGSASASELYSGLEHFANDGEMEDIFQELASSLN-YP 1913
            ...                 ||::.| |:.:.|...|...|||     |:|.| :||..:|: :.
  Rat   777 ELT-----------------GDRKKERDEVTRSTQSLACALEH-----EVEKI-EELEKTLHGFM 818

  Fly  1914 ELAEFSLNQM--CKGR----------------------FAGNWAQSSGKWTGQEQLVGVVRSPGL 1954
            |:.:.:..::  |:.|                      ....|.....|:..|:..:.:.....|
  Rat   819 EVMKIAGKKLDECENRELYFYEDMRNRTFETLQHEINYLKDTWEPIQCKYLHQDINIQLTEQELL 883

  Fly  1955 -------------INPGDVPQDAQRQANLVLLDYPMQQNI---QLEQRLLDAEEMHLQQHQQTPL 2003
                         ...|:|.::......||      |:::   :.|::|..|.|.:........:
  Rat   884 KIKSEQENYEHLHQTQGNVEKEVLTLRGLV------QESVTQAEEEKKLEKARENNNDSRMSQII 942

  Fly  2004 SLLPFTDEQQQQLHHQALSNASDFQQHQQLALENDPELKQQLQQNSNA----RIIKAVAAQHQQQ 2064
            ..:...:.:..::.....|...:.::|:||.:|.:...|......|..    .:.:|...|..||
  Rat   943 LRVKSLESRLPEIKSHVDSTRREMEKHKQLYVEENKSRKSLFNTLSKTVEKLEVSRAKLMQLNQQ 1007

  Fly  2065 PPTNFVYNVESGDKNAPPVQLLFQLPPHMAQHQAQQQQGVG---------EP--LTEQQQQQLHA 2118
            ..|     :|:         :|..||...:...|:....||         ||  :.|..::.|..
  Rat  1008 KMT-----MET---------ILSSLPAQQSPLVAKFNPAVGHNPSSPDAPEPQSVCESVRKGLSR 1058

  Fly  2119 EQAHLFQHRTGGQRPP 2134
            .|..|.:|:||....|
  Rat  1059 RQMGLVKHKTGEDSAP 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maskNP_001247280.1 ANK 555..684 CDD:238125
Ank_2 564..659 CDD:289560
ANK repeat 596..628 CDD:293786
ANK 633..751 CDD:238125
ANK repeat 633..661 CDD:293786
Ank_2 635..724 CDD:289560
ANK repeat 663..694 CDD:293786
ANK repeat 696..724 CDD:293786
Ank_5 716..771 CDD:290568
ANK 726..850 CDD:238125 5/15 (33%)
ANK repeat 730..760 CDD:293786
ANK repeat 765..794 CDD:293786
Ank_2 768..859 CDD:289560 7/24 (29%)
ANK repeat 796..827 CDD:293786
ANK repeat 829..858 CDD:293786 7/23 (30%)
ANK repeat 862..894 CDD:293786 10/34 (29%)
ANK 896..1014 CDD:238125 39/120 (33%)
ANK repeat 896..923 CDD:293786 11/26 (42%)
Ank_2 898..989 CDD:289560 31/90 (34%)
ANK repeat 927..957 CDD:293786 10/29 (34%)
ANK repeat 959..991 CDD:293786 11/31 (35%)
ANK 989..>1049 CDD:238125 11/62 (18%)
ANK repeat 993..1023 CDD:293786 7/32 (22%)
Ank_4 995..1046 CDD:290365 10/53 (19%)
ANK 2321..2349 CDD:197603
ANK repeat 2323..2352 CDD:293786
Ank_2 2326..2419 CDD:289560
ANK 2350..2477 CDD:238125
ANK repeat 2354..2386 CDD:293786
ANK repeat 2390..2419 CDD:293786
Ank_2 2393..2486 CDD:289560
ANK repeat 2421..2452 CDD:293786
ANK repeat 2456..2486 CDD:293786
ANK 2457..2579 CDD:238125
Ank_2 2461..2552 CDD:289560
ANK repeat 2492..2521 CDD:293786
ANK 2519..2645 CDD:238125
ANK repeat 2523..2589 CDD:293786
Ank_2 2528..2622 CDD:289560
ANK repeat 2560..2587 CDD:293786
ANK repeat 2591..2622 CDD:293786
KH-I 3049..3110 CDD:238053
PotehXP_006251849.1 Ank_4 25..75 CDD:290365 15/49 (31%)
ANK repeat 25..52 CDD:293786 7/26 (27%)
ANK 49..174 CDD:238125 39/124 (31%)
ANK repeat 54..85 CDD:293786 10/30 (33%)
Ank_2 59..150 CDD:289560 30/90 (33%)
ANK repeat 87..118 CDD:293786 12/30 (40%)
ANK repeat 120..150 CDD:293786 10/29 (34%)
Ank_5 140..>179 CDD:290568 15/46 (33%)
ANK repeat 153..183 CDD:293786 13/37 (35%)
DUF3496 939..1038 CDD:288825 19/112 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1115202at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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