DRSC/TRiP Functional Genomics Resources

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Protein Alignment mask and si:ch1073-398c20.3

DIOPT Version :9

Sequence 1:NP_001247280.1 Gene:mask / 50070 FlyBaseID:FBgn0043884 Length:4010 Species:Drosophila melanogaster
Sequence 2:XP_021331002.1 Gene:si:ch1073-398c20.3 / 100331458 ZFINID:ZDB-GENE-161017-19 Length:418 Species:Danio rerio


Alignment Length:506 Identity:104/506 - (20%)
Similarity:165/506 - (32%) Gaps:142/506 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 EEESED-SDESEGEEEEEDEEEIDVLQDNDADDEEIDDEDEEEDAPEVSSFLLDANNKRSSNISA 518
            :||||| ..|.....:.||.|::..|.....:..|::|..||:|..|....:  :..|.|.|   
Zfish     5 KEESEDLKIEETFRVKHEDAEQLTDLLPWKEEIPELNDVKEEKDLDEEGHLI--SGVKTSEN--- 64

  Fly   519 LLEAAANEKAPVLRHATHAIDETKQALTKMRCASSPRDKNGFSRSLVAACTDND---VNT-VKRL 579
                :|.:..||            ...|...|          .:||....|.||   ::| .|..
Zfish    65 ----SAQQTGPV------------SCFTCKEC----------GKSLTTKRTLNDHMRIHTGEKPC 103

  Fly   580 LCK--GNVNLNDAAAS----TDDGE-SLLSMACSAGYYELAQVLLAMSAAQVEDK---GQKDSTP 634
            .||  ||..::.:...    |..|| ......|..|:       ...|..:|..:   |||..| 
Zfish   104 QCKQCGNRYIDKSTLRRHMITHTGERPFTCQQCGKGF-------TRKSNLEVHTRIHTGQKAFT- 160

  Fly   635 LMEAASAGHLDIVKLLLNHNADVNAHCATGNTPLMFACAG-GQVDVVKVLLKHGANVEEQNENGH 698
               ....||    ......|.:|:....||..|  |.|.. |.....|:||:    |..:...|.
Zfish   161 ---CQQCGH----GFTRKSNLEVHTRIHTGEKP--FICPQCGNCFSRKMLLE----VHMRIHTGK 212

  Fly   699 TPLMEAASAGHVEVAKVLLEHGAGINTHSNE----FKESALTLACYKGHLDMVRFLLQAGADQEH 759
            .| ......|:....|..|:  ..:.||:.|    .:|..::. .||..|            :||
Zfish   213 KP-YACQHCGNSFTRKQSLD--VHMRTHNEERPHICQECGVSF-IYKNSL------------EEH 261

  Fly   760 KTDEMHTA-------------LMEASMDGHVEV-------------ARLLLDSGAQVNMPTDSFE 798
            ..:  ||.             ..:.:::.|:.:             ...:..:....:|.|.:.|
Zfish   262 MRN--HTGEKPFTCQHCGNGFTRKRNLEDHMRIHNEERPHICQECGVSFIYKNSLTEHMTTHTGE 324

  Fly   799 SPLTLAACGGHVELATLLIERGANIEE--VNDEGYTPL-MEAAREGHEEMVALLLSKGANINATT 860
            .|.|...||..       ..|..|:::  :...|..|. .|...:|        .:|.:|:....
Zfish   325 KPFTCQQCGNG-------FTRKRNLKDHMITHTGEKPFTCEQCGKG--------FTKKSNLKVHM 374

  Fly   861 E-ETQETALTLACCGGFMEVAAFLIKEGANLELGASTPLMEASQEGHTDLV 910
            . .|:|...|...||     .:|.:|:  |||......:...|...:|.::
Zfish   375 RVHTEERPYTCEQCG-----KSFTLKD--NLESHRRIHMAGKSHTAYTSII 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maskNP_001247280.1 ANK 555..684 CDD:238125 33/143 (23%)
Ank_2 564..659 CDD:289560 25/108 (23%)
ANK repeat 596..628 CDD:293786 6/35 (17%)
ANK 633..751 CDD:238125 27/122 (22%)
ANK repeat 633..661 CDD:293786 5/27 (19%)
Ank_2 635..724 CDD:289560 19/89 (21%)
ANK repeat 663..694 CDD:293786 10/31 (32%)
ANK repeat 696..724 CDD:293786 5/27 (19%)
Ank_5 716..771 CDD:290568 12/71 (17%)
ANK 726..850 CDD:238125 24/156 (15%)
ANK repeat 730..760 CDD:293786 5/29 (17%)
ANK repeat 765..794 CDD:293786 4/54 (7%)
Ank_2 768..859 CDD:289560 16/106 (15%)
ANK repeat 796..827 CDD:293786 7/32 (22%)
ANK repeat 829..858 CDD:293786 6/29 (21%)
ANK repeat 862..894 CDD:293786 10/31 (32%)
ANK 896..1014 CDD:238125 2/15 (13%)
ANK repeat 896..923 CDD:293786 2/15 (13%)
Ank_2 898..989 CDD:289560 2/13 (15%)
ANK repeat 927..957 CDD:293786
ANK repeat 959..991 CDD:293786
ANK 989..>1049 CDD:238125
ANK repeat 993..1023 CDD:293786
Ank_4 995..1046 CDD:290365
ANK 2321..2349 CDD:197603
ANK repeat 2323..2352 CDD:293786
Ank_2 2326..2419 CDD:289560
ANK 2350..2477 CDD:238125
ANK repeat 2354..2386 CDD:293786
ANK repeat 2390..2419 CDD:293786
Ank_2 2393..2486 CDD:289560
ANK repeat 2421..2452 CDD:293786
ANK repeat 2456..2486 CDD:293786
ANK 2457..2579 CDD:238125
Ank_2 2461..2552 CDD:289560
ANK repeat 2492..2521 CDD:293786
ANK 2519..2645 CDD:238125
ANK repeat 2523..2589 CDD:293786
Ank_2 2528..2622 CDD:289560
ANK repeat 2560..2587 CDD:293786
ANK repeat 2591..2622 CDD:293786
KH-I 3049..3110 CDD:238053
si:ch1073-398c20.3XP_021331002.1 C2H2 Zn finger 77..97 CDD:275368 6/29 (21%)
COG5048 90..411 CDD:227381 75/381 (20%)
C2H2 Zn finger 105..125 CDD:275368 4/19 (21%)
C2H2 Zn finger 133..153 CDD:275368 4/26 (15%)
C2H2 Zn finger 161..181 CDD:275368 4/23 (17%)
C2H2 Zn finger 189..209 CDD:275368 6/23 (26%)
C2H2 Zn finger 217..237 CDD:275368 3/21 (14%)
C2H2 Zn finger 245..265 CDD:275368 6/34 (18%)
C2H2 Zn finger 273..293 CDD:275368 1/19 (5%)
C2H2 Zn finger 301..321 CDD:275368 1/19 (5%)
C2H2 Zn finger 329..349 CDD:275368 4/26 (15%)
C2H2 Zn finger 357..377 CDD:275368 4/27 (15%)
C2H2 Zn finger 385..405 CDD:275368 7/26 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1115202at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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