DRSC/TRiP Functional Genomics Resources

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Protein Alignment Svopl and CG33233

DIOPT Version :9

Sequence 1:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus
Sequence 2:NP_995978.2 Gene:CG33233 / 2769005 FlyBaseID:FBgn0053233 Length:489 Species:Drosophila melanogaster


Alignment Length:510 Identity:102/510 - (20%)
Similarity:181/510 - (35%) Gaps:142/510 - (27%)


- Green bases have known domain annotations that are detailed below.


  Rat     5 FLLLLQVVEAMEIMLIAVVSPVIRCEWQLENWQVAFVTTMVFFGYMVSSILFGLLADRYGRWKIL 69
            |:.:..|.|:|....:.|::   .||:.....:...:...:..|.:.|.:..|.|||||||..::
  Fly    28 FIYMYSVTESMTAGYLVVLT---SCEFDTSPKEKTLLANSLLGGMVASGLFIGFLADRYGRKFVI 89

  Rat    70 LLSFLWGAYFSLLTSFSPSYIWFVFLRTMVGCGVSGHAQGLIIKTEFLPTKYRGYMLPLSQVFWL 134
            .|:.:....||::::..|.......:|.:||..:|..|...:           |::.....:.|.
  Fly    90 RLALVGALSFSVISALMPDLYSLSVIRIIVGTFLSAVASLQV-----------GFLGEFHAIKWR 143

  Rat   135 AGSLLIIS----MASVVIPTIG--------------------WRWLIRIASIPGIILIMAFKFIP 175
            ..::.|.|    :|.:..|.:.                    ||:|:....|||.:.::....:|
  Fly   144 PITVAICSQSQGLALIYCPLVAMAILPNNFNVDLSSSYNLRVWRFLMMFFMIPGWLALVGICLVP 208

  Rat   176 ESARFNVSTGNTQAALDTLESIAKMNRSVMPEGRLVEPILEKRGRFADLLESKYLRTTLQIWIIW 240
            |:..|.:|......||..|:.|.:|||              |:....|:..|:...:|......|
  Fly   209 ETPHFLMSVNRPDKALLALKWICRMNR--------------KKWEDVDITLSEEKSSTNDQEGFW 259

  Rat   241 LGISFAY-------------------YGVILASAEL----------------------------- 257
            ..:.:.|                   :|:...|..|                             
  Fly   260 KTVWYEYKLLFSKPHVFKFFICLFLIFGIFFTSIGLGIWFPVIRNMDNSGSNRLCDLVNNNPTFI 324

  Rat   258 -LERDLVCGSKSESEPEVVENMGDAEEGRSPCY-------CHMFAPSDYRTMIISTLGEIALNPL 314
             .|.|...|:.||| |:..:.|.:..:   |.|       |.:.|     ::::..:....:..|
  Fly   325 NHEADDTNGTDSES-PKCNDEMTNLID---PVYYGFTYIGCFILA-----SVLVHWMTRKYVIAL 380

  Rat   315 NILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPT 379
            :||....||..|::........:||:|:.:      |.|.|..|...|          ..:..|.
  Fly   381 HILISMILGISLNIMKQPTVVLIFFVLMMV------LPGVLIPLATSV----------LVDCLPV 429

  Rat   380 PMRALGMGTSGSLCRIG-----AMVAPFISQVLMSASF-LGALCLFSSVCVVCAI 428
            .:|...:....||.|.|     .|:..|| :|....:| :..|||  ::|||.|:
  Fly   430 NLRGKALCMVRSLARFGGVLGSTMIGLFI-RVTCDVTFNIFNLCL--AICVVLAV 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 102/510 (20%)
CG33233NP_995978.2 MFS_1 22..451 CDD:284993 90/475 (19%)
MFS 23..>208 CDD:119392 38/193 (20%)
MFS 354..>482 CDD:304372 34/152 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346930
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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