DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sf3b5 and AT3G23325

DIOPT Version :10

Sequence 1:NP_652189.1 Gene:Sf3b5 / 50007 FlyBaseID:FBgn0040534 Length:85 Species:Drosophila melanogaster
Sequence 2:NP_566727.1 Gene:AT3G23325 / 821913 AraportID:AT3G23325 Length:87 Species:Arabidopsis thaliana


Alignment Length:83 Identity:55/83 - (66%)
Similarity:69/83 - (83%) Gaps:1/83 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAENESKARVRFN 67
            :|:||:|||||||:||:||||||.::|||..|..|||.|||:|||.:|:|||||||||..|.|:|
plant     5 DRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYFAIAENESIGRERYN 69

  Fly    68 LMERMLQPCGPPPEKLED 85
            .|::||.|||.|||: ||
plant    70 FMQKMLLPCGLPPER-ED 86

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sf3b5NP_652189.1 SF3b10 3..77 CDD:462114 48/73 (66%)
AT3G23325NP_566727.1 SF3b10 5..79 CDD:462114 48/73 (66%)

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