DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45263 and ed

DIOPT Version :9

Sequence 1:NP_731246.2 Gene:CG45263 / 50003 FlyBaseID:FBgn0266801 Length:1876 Species:Drosophila melanogaster
Sequence 2:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster


Alignment Length:1570 Identity:316/1570 - (20%)
Similarity:510/1570 - (32%) Gaps:441/1570 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRSSRSRSSISTSISSSGSSTKIAQLLLLIGIAVASCLPGSEGFQRFSEQPKYTEVNPAEDTLLT 72
            ::::...::|..|.|:..::|.|....|:..:|::|.....|...        |..|  .|..|.
  Fly     3 RKTTTKGTAIVNSRSARRAATTICNFFLIALVALSSTTLADESID--------TREN--ADLTLK 57

  Fly    73 CKVIDKRGTCSWQKDNKPVGIYTKKYEWASRMPTSDN---GNV-----LHLDLHPPPVQLGGDCS 129
            |:..||      .:.|.....:|:   |.:.....||   |.|     ..||..|.    .|...
  Fly    58 CRFNDK------YEANDFSFFWTR---WTANPAQFDNVAIGEVQLSSGYRLDFQPE----RGIYD 109

  Fly   130 LWIRSATLDFDDGLWECQVTASDFTTQDALTSQPVRLVVRVAPQRPRLEYEAVHVPPGHNITADA 194
            |.|::.:.:.|:|.:||::.|.. |..|  ..|....:..:.|..|.:      :.||:...|..
  Fly   110 LQIKNVSYNRDNGRFECRIKAKG-TGAD--VHQEFHNLTVLTPPHPPV------ISPGNIAVATE 165

  Fly   195 GALATVKCISHYGNPPATLKWFL-GDQEISPIHPQMNATEPDNPRTWSATSVVQVSAMRERHGDI 258
            .....:.|.|..|:|..|:.|:. |.....|.......|: |.|    ..:.:.:...||..|..
  Fly   166 DKPMELTCSSIGGSPDPTITWYREGSNTPLPATVLKGGTK-DQP----TNATLSIIPRREDDGAK 225

  Fly   259 LRCAAYHESYT-AKSVVVEARLDVKYAPSIRLIGSPEIDLEEDKDALV-LRCVADANPPA-SIVW 320
            .:|...:.:.. .|.:...|.|:|.|.|.:.:  .||..|..::|... |.|..||.|.. ::.|
  Fly   226 YKCVVRNRAMNEGKRLEATATLNVNYYPRVEV--GPENPLRVERDRTAKLECNVDAKPKVPNVRW 288

  Fly   321 RRAGRSEIASLQETLQLRPVGRRDAGLYTCQAQNSVGTSEQLSVQLDVKYPPKIISAGPDRLTTA 385
            .|.||...:||..|  :..|..:|||.|||.|.|.:|.:.:..:.||:.|||.::.....|  .|
  Fly   289 NRNGRFISSSLVHT--IHRVSVQDAGKYTCIADNGLGKTGEQELILDILYPPMVVIESKTR--EA 349

  Fly   386 PLFSPAAFECLADGNPLP-SFKWVQRMAHGSKYVERGSESRLVIDNVTYEYQGEYECRATSYING 449
            .........|....||.| :.:|::..:...:|    :...|.:.:|..::.|.|.|||.:.:..
  Fly   350 EEGDTVTIRCNVTANPAPVTIEWLKENSPDFRY----NGDVLTLTSVRADHAGNYICRAVNIMQS 410

  Fly   450 Q-----ERVAISDPVSLQVVGAPQVLRLHPSLHTVSVKRGEAASLTMVVCADPR----PQRVAWE 505
            |     |||. :..|:|.|...|....:.|:...|.|..|    :|:...|:|.    ||   :.
  Fly   411 QGMERSERVG-NSTVALLVRHRPGQAYITPNKPVVHVGNG----VTLTCSANPPGWPVPQ---YR 467

  Fly   506 WGSLRLEAGSGIDRFRADDMQPDTREDCYLSTLHILHADEHDSRPYYLVVENERGTD-RHAIHLI 569
            |             ||  ||..:     :.||..||     ...|.|.:.:...|.: ::..|.:
  Fly   468 W-------------FR--DMDGE-----FSSTQKIL-----AQGPQYSIPKAHLGNEGKYHCHAV 507

  Fly   570 VEGTFAEPYEMSYLMGVAGGCMAAILLLVCLCIYAIKSKRCCFKGSTGYKSSDKDSEKADLKSRS 634
            .|            :|:  |.||.|:|.:                                    
  Fly   508 NE------------LGI--GMMATIVLEI------------------------------------ 522

  Fly   635 DSTSGPQGDSIYTTPAGFHHHQQQQQQQQQQQHAAAAAAAALHAASQHPQQQYPGHGSPEAMKVR 699
                                ||..|...:.|||.....|...:..:...:    |..:|....::
  Fly   523 --------------------HQPPQFLAKLQQHMTRRVADTDYTVTCSAK----GKPAPSVKWLK 563

  Fly   700 MAAMILQPPTRVXQAIDTTSES--NEQLTQQQQQDDNKNKNKNENE------------HQNELTD 750
            .|..||  |... ..:.|..:.  |..:|.|.|.........|.|.            :|||:..
  Fly   564 DAVEIL--PEENLYEVQTNPDQGLNGMVTVQSQLKFRGKARPNGNALVPGDRGLYTCLYQNEVNS 626

  Fly   751 QHTTSNEQRLDDSSVSHNNNN-NHKISSTSTTVLTNSD----------NNNTSEVAKASD----- 799
            .:::...:...:..|.|..|. ...|..|:..|.....          .||.|.:..:||     
  Fly   627 ANSSMQLRIEHEPIVLHQYNKVAFDIRETAEVVCKVQAYPKPEFQWQFGNNPSPLTMSSDGHYEI 691

  Fly   800 SSNSEGGSSLTS-----SKTSSSKRDLENNMNRDIKPATAPKLLHLNVTSGEQQEHQQPGPVDPL 859
            |:.::.....||     |.|.|...:....:...:....||..|            ||.||    
  Fly   692 STTTDNNDIYTSVLKINSLTHSDYGEYTCRVANTLDTIRAPIRL------------QQKGP---- 740

  Fly   860 PVGPLTPEETQVLLQKLSIN-NP-----------FYRFR-----KQSNSLKELRRKTGSDAPSVR 907
            |..|.....|:|....:|:: :|           |..:|     ::...:.:......|::..|.
  Fly   741 PEKPTNLRATEVGHNYVSLSWDPGFDGGLSKTKFFVSYRRVAMPREEQLIPDCATLANSNSAWVE 805

  Fly   908 SRSETDLGQVRGQQLMPHQQHSEAKVVVVLDSKQKEVAISRPRSSVSLKTRSVSSL--------S 964
            ...:.|: ..:...|..||  |.|..|..|:.|.     ..|.||..:.|..||.:        .
  Fly   806 VDCQRDI-PCKVTALEQHQ--SYAFKVKALNPKS-----DSPYSSEIMVTTKVSRIPPPLQVTYE 862

  Fly   965 PSTNQMG--------------DSSTVITNPFSIFHDDEILTLSVNTRLRSAANARSSRPQRQGR- 1014
            |:|..:|              :|.....:|.:.:   |::|...|.:|  :.|..:.:.:...| 
  Fly   863 PNTRTLGIDVGATCLNLVAVVESMVNADSPMAAW---EVVTTMDNLQL--SGNGPTHKEKIIDRI 922

  Fly  1015 -GLRRLFESNRSQNPPSEHHYLHGVPVRRFERQDFDNDSGDL------------LGRRTNTSSGK 1066
             |.||:.......:..||....:|:.....|    |.:|..:            .|..|:...|:
  Fly   923 IGARRVGGGRALGHTISEDEDDNGLNSLALE----DENSPTVRVKLCLRTNPEHCGDYTDAEIGR 983

  Fly  1067 PKRSR-------------------AIFKQLSL------RKLHNRAAAEE---------------- 1090
            |..:.                   |:|..|.|      |....::||.:                
  Fly   984 PYIAEANALATPTLIAIIVSCVVFALFAGLILMFCRCKRNQSKKSAAAKDYEMDSVRPSIVAAQQ 1048

  Fly  1091 ----PPSLPKLKLSYPNRTHSIQ---SMRASGGGGYDIQHTTAYHPRLNHSTSPVTKANYFERLQ 1148
                ||..|...|......||:.   ||.......|..|:..:|||     .|.|........:.
  Fly  1049 NQAPPPYYPASGLDNKALEHSMDLALSMEDQKTALYATQNGYSYHP-----GSGVVGVGMGGGVV 1108

  Fly  1149 AKTRQGIQKIRDKCRNFKTTTGEGGSLGGSEFSGF----------HTLAKDESFRFISDRANISS 1203
            .....|           ...:|.||.:||...||.          ||:..:|....         
  Fly  1109 GVGVGG-----------SVVSGMGGGVGGIGGSGVGVNGIPGLSAHTMPGNEWVNM--------- 1153

  Fly  1204 YESRCKQATIYKSYKSEIDLSKNLHYLDAYLEQNFDH-----------QLSTTKQSAHSVGRVSG 1257
                                        .|:|.|:.:           .|...|.||.:||...|
  Fly  1154 ----------------------------GYMENNYSNSNNGGSVNSQDSLWQVKMSAAAVGNQQG 1190

  Fly  1258 AQRKALAKQHDPTPETPRPPRHKRSQSQAANYGANYENLGTLPIASKSKVRNTALNSDSMSSSDY 1322
            ..:..:.:..:..|.....|..........:| |.|.:|...|.....:..|.. ||.:.|..||
  Fly  1191 MVQAPMNQYVEQQPAYGYDPLTHGGYGAVDDY-APYPHLTATPSQVGDEYHNLR-NSQNPSRQDY 1253

  Fly  1323 ASVFSGPTTNRQEPEEDPKDFKLRYEHPDKMCEYYFD--NLTS-YALALEESEDLLLAESAKSAR 1384
            .   |.|..:.|:|:      |...:|.|..   |.|  .|.: |.:...|.:::|..:...|  
  Fly  1254 C---SDPYASVQKPK------KRVDQHLDSP---YHDVSGLPNPYNMEHLEQDEVLPPQQHMS-- 1304

  Fly  1385 FFYDDDEEDD 1394
            ..|||..|.:
  Fly  1305 LSYDDSFEGE 1314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45263NP_731246.2 I-set 53..149 CDD:254352 24/103 (23%)
Ig 198..281 CDD:299845 18/84 (21%)
IG_like 302..368 CDD:214653 24/67 (36%)
IGc2 302..357 CDD:197706 22/56 (39%)
Ig 372..446 CDD:299845 16/74 (22%)
Ig 475..568 CDD:299845 20/97 (21%)
IG_like 478..570 CDD:214653 21/96 (22%)
edNP_001260013.1 Ig 50..147 CDD:299845 27/114 (24%)
I-set 146..249 CDD:254352 23/113 (20%)
Ig 168..249 CDD:299845 18/85 (21%)
IGc2 268..323 CDD:197706 22/56 (39%)
Ig_3 341..406 CDD:290638 15/70 (21%)
Ig_2 437..514 CDD:290606 24/122 (20%)
I-set 526..633 CDD:254352 21/112 (19%)
Ig 546..632 CDD:143165 16/91 (18%)
IG_like 654..736 CDD:214653 16/93 (17%)
Ig 656..734 CDD:143165 14/77 (18%)
FN3 741..848 CDD:238020 22/114 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11640
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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