DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG45263 and igcm-3

DIOPT Version :9

Sequence 1:NP_731246.2 Gene:CG45263 / 50003 FlyBaseID:FBgn0266801 Length:1876 Species:Drosophila melanogaster
Sequence 2:NP_001123175.1 Gene:igcm-3 / 180569 WormBaseID:WBGene00020160 Length:591 Species:Caenorhabditis elegans


Alignment Length:521 Identity:116/521 - (22%)
Similarity:204/521 - (39%) Gaps:109/521 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 VKCISHYGNPPATLKWFLGD---QEISPIHPQMNATEPDNPRT-WSATSVVQVSAMRERHGDILR 260
            :.|:|.  .|.:.|::...|   :.|:.:...:|:.:....|. :.|.::..::......|..:.
 Worm    59 IYCVSE--APVSQLRFVCTDCLEKNITDMVNVLNSAQDITRRVGFPAVTLKDIAVNTNWTGATIM 121

  Fly   261 CAAYHESYTAKSVVVEARLDVKY----------APSIRLIGSPE----IDLEEDKDAL------- 304
            |.|.....|..|  ..|.:||:|          ..|..|||:..    ::.....|.|       
 Worm   122 CQAALNGGTVDS--SPATVDVRYLRQPHVVDSNGQSPVLIGNQGYRFFVECVRGADGLCQQSGRR 184

  Fly   305 -VLRCVADANPPAS-IVWRRAGRSEIASLQETLQLRPVGRRDAGLYTCQAQNSVGTSEQL----S 363
             .|:|...:||||: ..|.:.|.......:.|:....:|:.    ..|||.|.:.....:    :
 Worm   185 KTLKCDVQSNPPATQYRWLKNGSPSGTGAEITIGTEMIGQS----IQCQANNGLHDESNMPLSQA 245

  Fly   364 VQLDVKYPPKIISAGPDRL-TTAPLFSPAAFE--------CLADGNPLPSFKWVQRMAHG----- 414
            ||:|.....|::.....:| :|:|..:....|        |..:|||.|...|..|..:|     
 Worm   246 VQIDPYSSAKLLKDNFQKLQSTSPFLASNRIEMNQQVNMGCEVEGNPRPIVYWRMRKPNGDVVDA 310

  Fly   415 -------SKYVE---RGSES----------RLVIDNVTYEYQGEYECRATSYIN-GQERVAIS-- 456
                   .:|.|   .|..|          .|.|.|  |.|.|:|.|.|.|.:: |:...:.|  
 Worm   311 ACPQGLEGQYQELPPEGGRSANIVRLTALCSLRISN--YSYSGQYWCAACSQVSQGEPECSPSLE 373

  Fly   457 ----DPVSLQVVGAPQVLRLHPSLHTVSVKRGEAASLTMVVCADPR---PQRVAWEWGSLRLEAG 514
                ..:::||:|||......||:.    :||..|::.:..||:|.   |:.:.:......|:.|
 Worm   374 TPGTSSLNVQVIGAPSNSDAPPSIE----QRGNDATVLVHYCAEPMPRPPREIVFSIDQNDLQVG 434

  Fly   515 SGIDRFRADD-MQPDTREDCYLSTLHILHADEHDS-RPYYLVVENERGTDRHAIHL--IVEGTFA 575
            ...:.||.|. :..:|..:||::.|.|....|.|. |...|.::|:.|:.:..:.:  ::.|..|
 Worm   435 QSWENFRFDSAVTNNTVPNCYIARLSISPVREEDQYRRIALKLQNQFGSKQIPVSMDALLGGDSA 499

  Fly   576 -----EPYEMSYLMGVAGGCMAAILLLVCLCIYAIKSKRCCFKGSTGYKSSDKDSEKADLKSRSD 635
                 ..:.|..|:|||.       ||..:||.|:    |..:....:...::...||:|....:
 Worm   500 MVGRMPTFWMYILIGVAA-------LLFVICIIAV----CVRRRVKDHPDYNEPKTKANLNIHQE 553

  Fly   636 S 636
            :
 Worm   554 N 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45263NP_731246.2 I-set 53..149 CDD:254352
Ig 198..281 CDD:299845 15/84 (18%)
IG_like 302..368 CDD:214653 18/78 (23%)
IGc2 302..357 CDD:197706 16/63 (25%)
Ig 372..446 CDD:299845 26/107 (24%)
Ig 475..568 CDD:299845 24/97 (25%)
IG_like 478..570 CDD:214653 23/98 (23%)
igcm-3NP_001123175.1 Ig_3 <186..232 CDD:290638 13/49 (27%)
IG_like 280..365 CDD:214653 22/86 (26%)
Ig 286..>313 CDD:299845 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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