DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15864 and PH4alphaNE1

DIOPT Version :10

Sequence 1:NP_652183.2 Gene:CG15864 / 50001 FlyBaseID:FBgn0040528 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster


Alignment Length:542 Identity:159/542 - (29%)
Similarity:244/542 - (45%) Gaps:99/542 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIGFLSACFINCQGFVKSNPKKSYAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLID 73
            |:|.:   |:..||.:.|:    |.:|...|..||..|..|...|:..|..::.....:|..|..
  Fly     7 LVGLI---FLLAQGSLASD----YFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSS 64

  Fly    74 MSRENMEMKSDYESYLGNPLNSFRLIHRLHTSWR----KWYQYAIKVENNALGHIENARLMRKML 134
            :.:|:....||.|:||.||:|.:||:.||||.|.    :....|.::..||      .|......
  Fly    65 IEKEHTMAASDTENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEMNFNA------TREYGLSY 123

  Fly   135 PTSSDLQQACRGIHDLMSFYDLKPEELAAGNLAGYSQPGTGLTAYDCLALGEFSVQKREDDLAEA 199
            |:..|::.|...:..|.|.|.|...::|.|.|.|... |:.::..||..||:...:..:.:..:.
  Fly   124 PSQEDVEGAALALVRLQSTYKLDVAQVAQGILNGVKY-GSDMSWQDCFELGQQLFEMEDYNNTKV 187

  Fly   200 WYNLSLIRFENKFDKYRVHKA---------WGLLLAKNK---QLTD---AF-------------- 235
            |...|:.|...:......|.|         ...:.|..|   ||.|   ||              
  Fly   188 WLRESMERLRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRI 252

  Fly   236 --YHFENK----PEGI------------IASNEVIHFKEELSTKQNCAVVVQKPSRLHCRYNTTT 282
              :|..:|    ||.|            ..|.|...: |::...:...:|.|:   |.|||:...
  Fly   253 RNWHLGDKGTAPPEDIDDVYLPKHSDSYSLSQEFAKY-EKVCRGEVHPIVRQE---LRCRYSRGN 313

  Fly   283 TPFTRIAPLKMEELGLDPYMVVFHDVIYDTEIDGM-------LNSSNFGLSLTDSGQ--KSEVRT 338
            .|:..:||||:||..||||:..|||::...:|..:       ::.|.  ::....||  ||..|.
  Fly   314 HPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMAVPRMHRST--VNPLPGGQLKKSAFRV 376

  Fly   339 SKDSYIV------------DAKTLNERVTDMTGFSMEMSDPFSLINYGLGGHYMLHYDFHEYTNT 391
            ||::::.            |.|       |.||......:...:.|||:||||..|:||....|.
  Fly   377 SKNAWLAYESHPTMVGMLRDLK-------DATGLDTTFCEQLQVANYGVGGHYEPHWDFFRDPNH 434

  Fly   392 TRPKQGDRIATVLFYLGEVDSGGATIFPMINITVTPKKGSAVFWYNLHNSGAMNLKSLHSACPVI 456
            ...::|:||||.:|||.||:.||||.||.::|.|.|:.|:.:||||||.|...:.::.|:.|||:
  Fly   435 YPAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGCPVL 499

  Fly   457 SGSKYVLTKWINELPQMFVTPC 478
            .|||::...||:|:.|.|..||
  Fly   500 KGSKWIGNVWIHEVTQTFARPC 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15864NP_652183.2 P4Ha_N 35..168 CDD:462433 40/136 (29%)
P4Hc 313..467 CDD:214780 59/174 (34%)
PH4alphaNE1NP_733374.1 P4Ha_N 26..157 CDD:462433 40/136 (29%)
P4Hc 341..511 CDD:214780 60/178 (34%)

Return to query results.
Submit another query.