DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ORC4 and orc4

DIOPT Version :10

Sequence 1:NP_002543.2 Gene:ORC4 / 5000 HGNCID:8490 Length:436 Species:Homo sapiens
Sequence 2:NP_001005654.1 Gene:orc4 / 448135 XenbaseID:XB-GENE-1012480 Length:432 Species:Xenopus tropicalis


Alignment Length:434 Identity:315/434 - (72%)
Similarity:372/434 - (85%) Gaps:2/434 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLI 65
            ||.||||...|...||:|:|..|||:|..:.  |...|||..|:|||.||||||.:||||||.||
 Frog     1 MSKRKSKDLCLPVGECISRVHAILRQRLFQH--HGKPFGVDSQHKHLVELLKRTVVHGESNSALI 63

Human    66 IGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENVVGDKVFG 130
            ||||||||:||:..||:|::.:::|.||.|||.||||||..||||||||||||:|||||||:|||
 Frog    64 IGPRGSGKSMLLKGALEEILAMKQVKENALQVRLNGLLQTTDKIALKEITRQLHLENVVGDRVFG 128

Human   131 SFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCR 195
            ||||||:|||||||.|||.|||||:|:||||||||||||||||||||||:||||||:||||||||
 Frog   129 SFAENLAFLLEALKTGDRKSSCPVLFLLDEFDLFAHHKNQTLLYNLFDIAQSAQTPVAVIGLTCR 193

Human   196 LDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEFPDKVFAEKWNENVQYLSEDR 260
            ||::||||||||||||||||||:|||.|.||::||:|:|.|||.|||..|||||||:::.|.|.:
 Frog   194 LDVMELLEKRVKSRFSHRQIHLLNSFSFIQYLEIFQEKLFLPASFPDSQFAEKWNESIKSLVESK 258

Human   261 SVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAVDLMEASQLCSMDSKANIVHGLSVLE 325
            .|:::|||.::.||::|||||||:||:.||:.|||.:||.|.:|..:|.:.||||||:|||||||
 Frog   259 MVEDILQKQYSASKDVRSLHMLLLLAVCRVSVSHPHITAADFLEVFRLRNQDSKANIMHGLSVLE 323

Human   326 ICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMER 390
            :|||||||||.|||:.||||||||:||||||:||||||||||||||||||||||.|||||||||.
 Frog   324 LCLIIAMKHLQDIYDGEPFNFQMVHNEFQKFIQRKAHSVYNFEKPVVMKAFEHLHQLELIKPMEG 388

Human   391 TSGNSQREYQLMKLLLDNTQIMNALQKYPNCPTDVRQWATSSLS 434
            .|..:|:||:||||||||||::.||||||||||||:|||.||||
 Frog   389 LSMRTQKEYRLMKLLLDNTQVIEALQKYPNCPTDVKQWAMSSLS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ORC4NP_002543.2 CDC6 43..>226 CDD:441083 147/182 (81%)
ORC4_C 228..415 CDD:464223 128/186 (69%)
orc4NP_001005654.1 CDC6 39..>214 CDD:441083 140/174 (80%)
ORC4_C 226..413 CDD:464223 128/186 (69%)

Return to query results.
Submit another query.