DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ORC4 and Orc4

DIOPT Version :10

Sequence 1:NP_002543.2 Gene:ORC4 / 5000 HGNCID:8490 Length:436 Species:Homo sapiens
Sequence 2:XP_038960388.1 Gene:Orc4 / 295596 RGDID:735212 Length:461 Species:Rattus norvegicus


Alignment Length:450 Identity:388/450 - (86%)
Similarity:414/450 - (92%) Gaps:16/450 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLI 65
            ||:||||:|  ||.|||||||||||||||..:|||||||||||||||.|||||||::|||||:||
  Rat    14 MSNRKSKNN--IHAECLSQVQRILRERFCHHTPHSNLFGVQVQYKHLIELLKRTAIYGESNSLLI 76

Human    66 IGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENVVGDKVFG 130
            :||||||||.|:||||||||:|.::||||||||||||||.|||||||||||||||||||||||||
  Rat    77 VGPRGSGKTTLLNHALKELMQIGDMSENVLQVHLNGLLQTNDKIALKEITRQLNLENVVGDKVFG 141

Human   131 SFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCR 195
            |||||||||||||:||:|||||||||||||||||||.||||||||||||||||||||||||||||
  Rat   142 SFAENLSFLLEALQKGNRTSSCPVIFILDEFDLFAHQKNQTLLYNLFDISQSAQTPIAVIGLTCR 206

Human   196 L--------------DILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEFPDKVFA 246
            |              |||||||||||||||||||||||||.||||:||||||||||||||||:||
  Rat   207 LLILRRSELLKVYFHDILELLEKRVKSRFSHRQIHLMNSFDFPQYLKIFKEQLSLPAEFPDKIFA 271

Human   247 EKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAVDLMEASQLCSM 311
            ||||||...||||.:|.||||||||::|||:||||||||||||||.:|||||:.|||||..|||:
  Rat   272 EKWNENAHCLSEDSTVLEVLQKHFNVNKNLQSLHMLLMLALNRVTVTHPFMTSADLMEAQHLCSL 336

Human   312 DSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAF 376
            |:||:||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||
  Rat   337 DAKASIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFIQRKAHSVYNFEKPVVMKAF 401

Human   377 EHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPNCPTDVRQWATSSLSWL 436
            ||||||||||||||||.||||||||:||||||||||||||||.|||||||||||||||||
  Rat   402 EHLQQLELIKPMERTSVNSQREYQLVKLLLDNTQIMNALQKYSNCPTDVRQWATSSLSWL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ORC4NP_002543.2 CDC6 43..>226 CDD:441083 166/196 (85%)
ORC4_C 228..415 CDD:464223 164/186 (88%)
Orc4XP_038960388.1 CDC6 54..>251 CDD:441083 166/196 (85%)
ORC4_C 253..440 CDD:464223 164/186 (88%)

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