DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GCS2alpha and ROT2

DIOPT Version :10

Sequence 1:NP_652145.1 Gene:GCS2alpha / 49953 FlyBaseID:FBgn0027588 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_009788.3 Gene:ROT2 / 852530 SGDID:S000000433 Length:954 Species:Saccharomyces cerevisiae


Alignment Length:989 Identity:334/989 - (33%)
Similarity:512/989 - (51%) Gaps:159/989 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KTCEQSSFCRRSR----KIQGSGSKYALIPGTLNTYADSLTADLVNKENHH-------------- 73
            |.|.||.||.|:|    .|..|...|..:.      |:|:..|.:....|.              
Yeast    27 KKCAQSGFCHRNRVYAENIAKSHHCYYKVD------AESIAHDPLENVLHATIIKTIPRLEGDDI 85

  Fly    74 --QFAFKLEALVGSTFRLQIDEK--------------QPLRPRYRVEHALKGPTQAGRIRV---- 118
              ||.|.|..|...:.|..|:||              |.....::.....|...:|.|..:    
Yeast    86 AVQFPFSLSFLQDHSVRFTINEKERMPTNSSGLLISSQRFNETWKYAFDKKFQEEANRTSIPQFH 150

  Fly   119 ---QRET-------------------------DGEIVITSEKNKAVIHGDPFRIDFFENDVLVVS 155
               |::|                         :|::.:.       |..:||::..:..:.|.:.
Yeast   151 FLKQKQTVNSFWSKISSFLSLSNSTADTFHLRNGDVSVE-------IFAEPFQLKVYWQNALKLI 208

  Fly   156 VNAKNWLYFEHLRQKAQEPTSHPAENENQQEQDAAVETPKAADTIDDPGAWEENF-KSHHDSKPY 219
            ||.:|:|..||.|.| ||..:|....|.....                  :::|| .|.|||.|.
Yeast   209 VNEQNFLNIEHHRTK-QENFAHVLPEETTFNM------------------FKDNFLYSKHDSMPL 254

  Fly   220 GPEAVALDFSFPAAKVLFGIPEHADSFILKSTS-GTDPYRLYNLDVFEYVVDSKMALYGSVPVIY 283
            |||:|||||||..:..::||||||.|..|..|| |.:||||:|:|||||.:.:...:|||:|.::
Yeast   255 GPESVALDFSFMGSTNVYGIPEHATSLRLMDTSGGKEPYRLFNVDVFEYNIGTSQPMYGSIPFMF 319

  Fly   284 GHGAQRTAGVYWQNAAETWVDIQTSETNVVSSLVNFVSGSQKTPPPAAHFMSESGIVDAFIMLGP 348
               :..:..::|.|||:|||||:            :.:...||   ..|::||:|::|..:.|||
Yeast   320 ---SSSSTSIFWVNAADTWVDIK------------YDTSKNKT---MTHWISENGVIDVVMSLGP 366

  Fly   349 KPMDTFKQYAALTGTHELPQLFALAYHQSRWNYNDERDVTSVSAKFDEYNIPMDTMWLDIEHTDG 413
            .......::..|||...||.:.::.|||.|||||||.||.:|.::.|.:.||.|.:|||:|:|:.
Yeast   367 DIPTIIDKFTDLTGRPFLPPISSIGYHQCRWNYNDEMDVLTVDSQMDAHMIPYDFIWLDLEYTND 431

  Fly   414 KRYFTWDKFKFPHPLAMIKNLTELGRHLVVIVDPHIKRDNNYFFHRDCTDRGYYVKTREGNDYEG 478
            |:||||.:..||:|..::..|.:|||:|||::|||:|:|  |.......:....||...||||.|
Yeast   432 KKYFTWKQHSFPNPKRLLSKLKKLGRNLVVLIDPHLKKD--YEISDRVINENVAVKDHNGNDYVG 494

  Fly   479 WCWPGAASYPDFFNPVVREYYASQYALDKFQTVTAD---VMLWNDMNEPSVFNGPEITAPKDLIH 540
            .||||.:.:.|..:...::.:.|.:  ::|..:.||   :.:||||||||:|:|||.||||||||
Yeast   495 HCWPGNSIWIDTISKYGQKIWKSFF--ERFMDLPADLTNLFIWNDMNEPSIFDGPETTAPKDLIH 557

  Fly   541 YGNWEHRDVHNLYGHMHLMGSFAGLQQ--RDPNQRPFILTRAHFAGSQRYAAIWTGDNFADWSHL 603
            ....|.|.|||:||......::..::.  ...::|||:||||.||||||.||.|||||.|:|.:|
Yeast   558 DNYIEERSVHNIYGLSVHEATYDAIKSIYSPSDKRPFLLTRAFFAGSQRTAATWTGDNVANWDYL 622

  Fly   604 QHSVKMCLTEAVAGFSFCGADVGAFFGNPDTELLERWYQTGAFLPFFRAHAHIDTKRREPWLFPE 668
            :.|:.|.|:..:||..|.|||:..|..:|..||:.||||.|.:.||||||||||||||||:||.|
Yeast   623 KISIPMVLSNNIAGMPFIGADIAGFAEDPTPELIARWYQAGLWYPFFRAHAHIDTKRREPYLFNE 687

  Fly   669 RTRQVIQNAVIKRYSYLPLWYTAFYELELTGEPVIRPLLAQYPLDKEAFGVDNQLLVQDR-LLVR 732
            ..:.::::.:..||..||..||.|::..:||.|::.|:..::|...|.:.:|||....:. |||:
Yeast   688 PLKSIVRDIIQLRYFLLPTLYTMFHKSSVTGFPIMNPMFIEHPEFAELYHIDNQFYWSNSGLLVK 752

  Fly   733 PVMQQGVSKVDVYFPAIDDKKNGDWWYDVDTYQRQERSG------YVSVPVDDFKIPVWQRGGSI 791
            ||.:.|.|:.::.||.       ..:|:..:......:|      .:|.|:|  |||::..||.|
Yeast   753 PVTEPGQSETEMVFPP-------GIFYEFASLHSFINNGTDLIEKNISAPLD--KIPLFIEGGHI 808

  Fly   792 VPKKERQRRASTLMLHDPYTLIICLDRQGKASGSLYLDDEKSYAYRQGQRIHVNYEFAHDQLVNS 856
            :..|::.||:|.||.:|||.::|..|.:|:|.|.||:||.:::.|::|:.:...:.|.::.|.|.
Yeast   809 ITMKDKYRRSSMLMKNDPYVIVIAPDTEGRAVGDLYVDDGETFGYQRGEYVETQFIFENNTLKNV 873

  Fly   857 FVGKPK------YKTL--AWIERIVIA--GLE---KVPSSASITVNGVSQQLEV---LHHDNTVV 905
            ....|:      :.||  ..||:|:||  .|:   .:..|..:..||....|..   ..:||.:.
Yeast   874 RSHIPENLTGIHHNTLRNTNIEKIIIAKNNLQHNITLKDSIKVKKNGEESSLPTRSSYENDNKIT 938

  Fly   906 VRKPGVKMDVDFAI 919
            :....:.:..|:.:
Yeast   939 ILNLSLDITEDWEV 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCS2alphaNP_652145.1 GH31_N 224..362 CDD:270212 52/138 (38%)
GH31_GANC_GANAB_alpha 362..833 CDD:269889 203/482 (42%)
DUF5110 809..877 CDD:465360 24/77 (31%)
ROT2NP_009788.3 GH31_N 259..380 CDD:270212 52/138 (38%)
GH31_GANC_GANAB_alpha 380..850 CDD:269889 203/482 (42%)

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