DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GCS2alpha and Ganc

DIOPT Version :9

Sequence 1:NP_652145.1 Gene:GCS2alpha / 49953 FlyBaseID:FBgn0027588 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_766260.2 Gene:Ganc / 76051 MGIID:1923301 Length:913 Species:Mus musculus


Alignment Length:921 Identity:393/921 - (42%)
Similarity:552/921 - (59%) Gaps:40/921 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DGVDPGNFKTCEQSSFCRRSRKIQGSGSKYALIPGTLNTYADSLTADLVNKENHHQFAFKLEALV 83
            :.||...||.|.:.:|.||.::.....:.|..:.|:::|..||....::::........::..:.
Mouse    14 EAVDKTIFKDCGKIAFYRRQKQQLTKTTTYQALLGSVDTEQDSTRFQIISEATKIPLVAEVYGIE 78

  Fly    84 GSTFRLQIDEKQPLRPRYRVEHALKGPTQAGRIRVQRETD-GEIVITSEKN--KAVIHGDPFRID 145
            ...|||:|:|:.||:|||.|...:.  ::.|.:|:....| |.:::|:.|.  |..:..:||:||
Mouse    79 KDIFRLKINEETPLKPRYEVPDVIN--SKLGTVRLVCSGDTGSLILTNRKGDLKCHVSANPFKID 141

  Fly   146 FFENDVLVVSVNAKNWLYFEHLRQKAQEPTSHPAENENQQEQDAAVETPKAADTIDDPGAWEENF 210
            ....:..|:|:|:...||||||    |.|....|...|.|...||.    :.:..:|.|.|||.|
Mouse   142 LLSKNEAVISINSLGQLYFEHL----QVPHKQRATKGNGQNTPAAT----SQENQEDLGLWEEKF 198

  Fly   211 KSHHDSKPYGPEAVALDFSFPAAKVLFGIPEHADSFILKSTSGTDPYRLYNLDVFEYVVDSKMAL 275
            ....|.|..||.:|.||||....:.|:|||:||:|..||:|...|.||||||||:.|.|..||.:
Mouse   199 GKFVDVKANGPSSVGLDFSLHGFEHLYGIPQHAESHQLKNTRDGDAYRLYNLDVYGYQVHDKMGI 263

  Fly   276 YGSVPVIYGHGAQRTAGVYWQNAAETWVDIQTSETNVVSSLVNFVSGSQKTPPPA---------A 331
            |||||.:..|...||.|::|.||:||.|:|.| |..|..:|      :|..|..|         .
Mouse   264 YGSVPYLLAHKQGRTVGIFWLNASETLVEINT-EPAVEYTL------TQMGPAAAKQKVRCRTDV 321

  Fly   332 HFMSESGIVDAFIMLGPKPMDTFKQYAALTGTHELPQLFALAYHQSRWNYNDERDVTSVSAKFDE 396
            |:||||||:|.|::.||.|.|.||||:.:|||..:|.||:|.|||.||||.||:||.:|.|.|||
Mouse   322 HWMSESGIIDVFLLTGPTPADVFKQYSYITGTQAMPPLFSLGYHQCRWNYEDEQDVKAVDAGFDE 386

  Fly   397 YNIPMDTMWLDIEHTDGKRYFTWDKFKFPHPLAMIKNLTELGRHLVVIVDPHIKRDNNYFFHRDC 461
            ::||.|.||||||||:.|:||||||.:|.:|..|.:.|....|.||||.|||||.|.:|..:...
Mouse   387 HDIPYDVMWLDIEHTEDKKYFTWDKKRFANPKRMQELLRSKKRKLVVISDPHIKVDPDYTVYAQA 451

  Fly   462 TDRGYYVKTREGNDYEGWCWPGAASYPDFFNPVVREYYASQYALDKFQTVTADVMLWNDMNEPSV 526
            .::|::||..||.|:||.||||.:||.||.||.|||:|:|.:|...:|..|..:.||||||||||
Mouse   452 KEQGFFVKNPEGGDFEGVCWPGLSSYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSV 516

  Fly   527 FNGPEITAPKDLIHYGNWEHRDVHNLYGHMHLMGSFAGLQQRDP-NQRPFILTRAHFAGSQRYAA 590
            |.|||:|..|..:|||:||||::||:||....|.:..||.||.. .:|||:|:|:.|||||:|.|
Mouse   517 FRGPELTMHKSAVHYGDWEHRELHNIYGFYQQMATAEGLIQRSKGKERPFVLSRSFFAGSQKYGA 581

  Fly   591 IWTGDNFADWSHLQHSVKMCLTEAVAGFSFCGADVGAFFGNPDTELLERWYQTGAFLPFFRAHAH 655
            :|||||.|:||:|:.|:.|.||.:|:|.||||||||.|.|||:.|||.||||.||:.||||.||.
Mouse   582 VWTGDNKAEWSYLKISIPMLLTLSVSGISFCGADVGGFIGNPEAELLVRWYQAGAYQPFFRGHAT 646

  Fly   656 IDTKRREPWLFPERTRQVIQNAVIKRYSYLPLWYTAFYELELTGEPVIRPLLAQYPLDKEAFGVD 720
            ::|||||||||.|...|:|:.|:.:||:.||..|:.||...::.:||:|||..:||.|.|.|.|:
Mouse   647 MNTKRREPWLFGEEYTQLIREAIRQRYALLPYLYSLFYHTHVSSQPVMRPLWVEYPDDLETFAVE 711

  Fly   721 NQLLVQDRLLVRPVMQQGVSKVDVYFPAIDDKKNGDWWYDVDTYQRQERSGYVSVPVDDFKIPVW 785
            ::.::...|||.||.....:.:||:.|..|:.     |||..|:...:....|.:||....|||:
Mouse   712 DEYMLGSALLVHPVTDPQTATIDVFLPGSDEV-----WYDSKTFAYWKGGCTVKIPVTLDTIPVF 771

  Fly   786 QRGGSIVPKKERQRRASTLMLHDPYTLIICLDRQGKASGSLYLDDEKSYAY-RQGQRIHVNYEFA 849
            |||||:||.|.....::..|...||.|.:.|..||.|.|.|||||..|:.| .|.|.::..:.|.
Mouse   772 QRGGSVVPVKTTVGTSTGWMADSPYELRVALSTQGSAVGELYLDDGHSFQYLHQNQFLYRKFLFC 836

  Fly   850 HDQLVNSFVG-KPKYKTLAWIERIVIAGLEKVPSSASITV-NGVSQQLEVLHHDNTVVVR--KPG 910
            ...|.|.... |..|.:...:|:|::.||:|.|||.:..: :|.:|.....:...|..:|  |..
Mouse   837 SSVLTNRCANEKGHYPSKCIVEQILVLGLKKKPSSVTTHLSDGRAQPAAFTYCAETSALRLEKLS 901

  Fly   911 VKMDVDFAIKL 921
            :::..|:.:::
Mouse   902 LRIGEDWEVRV 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCS2alphaNP_652145.1 GH31_N 224..362 CDD:270212 68/146 (47%)
Glyco_hydro_31 343..792 CDD:279404 233/449 (52%)
GH31_GANC_GANAB_alpha 362..833 CDD:269889 240/471 (51%)
GancNP_766260.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..188 5/22 (23%)
GH31_N 212..352 CDD:270212 68/146 (47%)
Glyco_hydro_31 333..778 CDD:279404 233/449 (52%)
GH31_GANC_GANAB_alpha 352..819 CDD:269889 240/471 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838271
Domainoid 1 1.000 542 1.000 Domainoid score I264
eggNOG 1 0.900 - - E1_COG1501
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 874 1.000 Inparanoid score I408
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54072
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000251
OrthoInspector 1 1.000 - - otm44348
orthoMCL 1 0.900 - - OOG6_100592
Panther 1 1.100 - - O PTHR22762
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1016
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.760

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