DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCS2alpha and CG33080

DIOPT Version :9

Sequence 1:NP_652145.1 Gene:GCS2alpha / 49953 FlyBaseID:FBgn0027588 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_788858.1 Gene:CG33080 / 31491 FlyBaseID:FBgn0053080 Length:925 Species:Drosophila melanogaster


Alignment Length:612 Identity:127/612 - (20%)
Similarity:202/612 - (33%) Gaps:180/612 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 NLDVFEYVV-DSKMALYGSVPVIYGHGAQRTAGVYWQNAAETWVDIQTSETNVVSSLVNFVSGSQ 324
            |.|...|.. |||:..       :|:|.:|    |:.|:  ..|.:|.||               
  Fly   400 NFDFAPYASGDSKIHQ-------FGNGVKR----YFINS--IGVAMQVSE--------------- 436

  Fly   325 KTPPPAAHFMSESGIV-----DAFIM---LGPKPMDTFKQYAALTGTHELPQLFALAYHQSRWNY 381
            |||.......:|:...     |.|..   |.|.|...::    :..|.::..|..|...||.|:.
  Fly   437 KTPLQLGVNRTENRFCLRAANDEFTFVNHLTPLPQLDYR----ICTTEDMRSLHMLMTQQSLWDG 497

  Fly   382 NDERDVTSVSAKFDEYNIPMDTMWLDIEHTD--------------------GKRY---------- 416
            ..|::...:.:..:|      .:| .|.||:                    |..:          
  Fly   498 LKEQEFKVLHSLLEE------PVW-RIPHTELPESLNESAICDYSESAIAMGLGHIVINEFWQEN 555

  Fly   417 ---FTWDKFKFPHPLAMIKNLTELGRHLVVIVDPHIKRDNNYFFHRDCTDRGYYVKTREG----- 473
               ||.||.:||.....|..|...|..:|:.:.|.|..|:..|  :|...|...:..|..     
  Fly   556 IGDFTVDKARFPTLKDTIDVLHRRGFKVVLTIQPFISTDSANF--KDAVKRKLLIYERHSERSIP 618

  Fly   474 --NDYEGWCWPGA------ASYPDFFNPVVR---EYYASQYALDKFQTVTADVMLWNDMNEPSVF 527
              ..|:.....|.      ||.|.....:.|   ||....:.||          |....|.|..:
  Fly   619 ALTRYKSSSSAGVLDITNNASVPWLLEKLQRLKEEYGVQSFYLD----------LGTGYNLPHYY 673

  Fly   528 NGPEITAPKDLIHYGNWEHRDVHNLYGHMHLMGSFAGLQQRDPNQRPFILTRAHFAGSQRYAAIW 592
            .     ..:.|.:...:......:|.|...:..|.|.:..:.|.          |..:....|.|
  Fly   674 Q-----CRQTLDNPDTYARLFTASLEGAGLMAVSTASVVPKPPT----------FLSTPPANATW 723

  Fly   593 TGDNFADWSHLQHSVKMCLTEAVAGFSF-----CGAD---------VGAFFG-----NPDTELLE 638
            .|        |:.::...|...|.|:.|     .|.|         :.:|:.     .||.||..
  Fly   724 EG--------LRETLGAVLNYGVIGYPFVLPGVIGGDYLLQRPLSKMVSFYSLSQPPLPDPELFI 780

  Fly   639 RWYQTGAFLPFFRAHAHIDTKRREPWLFP-----ERTRQVIQNAVIKRYSYLPLWYTAFYELELT 698
            ||.|...|:|..: .:|:.::.|...:..     :..||:|...::|:|....:         ..
  Fly   781 RWLQLATFMPAMQ-FSHLPSEYRSDLVTRVAQELKEVRQLIVIPLLKKYLNPSM---------NE 835

  Fly   699 GEPVIRPLLAQYPLDKEAFGVDNQLLVQDRLLVRPVMQQGVSKVDVYFPAIDDKKNGDWWYDVDT 763
            |.|::|||....|.|.....|.::..|.:.|:|.|::.....:.:||.|      .|.|...:|.
  Fly   836 GLPLVRPLWMMDPHDPACLIVSDEFSVGEELIVAPILHANREEREVYLP------QGVWKDGIDG 894

  Fly   764 YQRQE---RSGYVSVPVDDF----KIP 783
            ..|:.   ..|| .||.|..    |:|
  Fly   895 SLRKGSRWMHGY-RVPKDKIAYFRKMP 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCS2alphaNP_652145.1 GH31_N 224..362 CDD:270212 24/109 (22%)
Glyco_hydro_31 343..792 CDD:279404 107/524 (20%)
GH31_GANC_GANAB_alpha 362..833 CDD:269889 103/502 (21%)
CG33080NP_788858.1 GH31_NET37 511..888 CDD:269878 86/434 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1501
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm51469
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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