DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCS2alpha and aagr-2

DIOPT Version :10

Sequence 1:NP_652145.1 Gene:GCS2alpha / 49953 FlyBaseID:FBgn0027588 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_494897.3 Gene:aagr-2 / 173848 WormBaseID:WBGene00019895 Length:955 Species:Caenorhabditis elegans


Alignment Length:992 Identity:233/992 - (23%)
Similarity:351/992 - (35%) Gaps:275/992 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 WALFVLADGVDPGNFKTCEQSSFCRRSRKIQGSGSKYALIPGTLNTYADSLTADLVNKENHHQFA 76
            |..|  .|||   .:....|.......||..|..:.:.         |||....|..|.      
 Worm    53 WCYF--KDGV---GYNLDSQQGSTYNLRKNGGPSNPWG---------ADSTEIKLTTKS------ 97

  Fly    77 FKLEALVGSTFRLQIDEKQPLRPRYRVEHALKGPTQAGRIRVQRETDGEIVITSEKNKAVIHGDP 141
                  :||...::|.          ::...:.|....| ..|..|:...:.||..|        
 Worm    98 ------IGSVLNVKIG----------IDGRYEPPVDFPR-ETQSSTESLSLSTSFSN-------- 137

  Fly   142 FRIDFFENDVLVVSVNAK------NWLYFEHLRQKAQEPTSHPAENENQQEQDAAVETPKAADTI 200
               ..|...|:..|.|.|      ..|.|..  |..|..|..|:||..                 
 Worm   138 ---GVFSFSVVRQSTNRKLFDTSIGGLIFSD--QFIQIATYLPSENMY----------------- 180

  Fly   201 DDPGAWEENFKSHHDSKPYGPEAVALDFSFPAAKVLFG--IPEHADSFILKSTSGTDPYRLYNLD 263
                .|.||  :|        :::..||:......:|.  .|.::.|....:..|..||      
 Worm   181 ----GWGEN--TH--------QSLRHDFTKYLTWAMFARDQPPNSGSLDTVNLYGVHPY------ 225

  Fly   264 VFEYVV---DSKMALYGSVPVIYGHGAQRTAGVYWQNAAETWVDIQTSETNVVSSLVNFVSGSQK 325
               |::   |.|           .||                |.|..|....|::          
 Worm   226 ---YMILEPDGK-----------AHG----------------VLIINSNAQEVTT---------- 250

  Fly   326 TPPPAAHFMSESGIVDAFIMLGPKPMDTFKQYAALTGTHELPQLFALAYHQSRWNYNDERDV-TS 389
            .|.|:..:.:..|.:|.:...||.|....:||....|...||..:||.|..||:.|....:: |.
 Worm   251 APGPSLIYRTIGGNLDMYFFPGPTPEMVTQQYLKFIGKPFLPAYWALGYQLSRYGYKGLAEMKTR 315

  Fly   390 VSAKFDEYNIPMDTMWLDIEHTDGKRYFT----WDKFKFPHPLAMIKNLTELGRHLVVIVDPHIK 450
            :.|..|. .||:|....||::....:.||    |..|.     ..:|.:.:.|..|::|.||.|:
 Worm   316 IQAVRDA-GIPIDIGVADIDYMQRYKDFTTGDDWAGFS-----DYVKTMHDWGMKLILIFDPAIE 374

  Fly   451 RDNNYFFHRDCTDRGY-------YVKTREGNDYE---------GWCWP-GAASYPDFFNPV---- 494
            .....|......:..:       .|:|...|.|.         |..|| ...::|||.:..    
 Worm   375 ATYPSFQRAIAANAKFIEWETKAQVQTAIQNLYPMAKDTKIMLGVVWPDNHVAFPDFLDSTNNTQ 439

  Fly   495 ---VREY--YASQYALDKFQTVTADVMLWNDMNEPSVF-------------------------NG 529
               :.|:  |.||.|.|.         :|.||||||.|                         ||
 Worm   440 NWWINEFVNYQSQVAFDG---------IWIDMNEPSNFGTNQDHPWYFDSDDHPNDAPLFCPTNG 495

  Fly   530 PEITAPKDLIHYGN---WEHRD---------------------------VHNLYGHMHLMGSFAG 564
               ::|.::..|..   |...|                           |.||||....:.:...
 Worm   496 ---SSPWEMPPYKTRAVWRFGDANSGAFLSSNTLCMLAQQDGGKQRFYNVKNLYGLTEAINTQKA 557

  Fly   565 LQQRDPNQRPFILTRAHFAGSQRYAAIWTGDNFADWSHLQHSVKMCLTEAVAGFSFCGADVGAFF 629
            | .:...:|..:::|:.:..:.|||..|.|||.|.|..|:.||.......:.|..:.|:||..|.
 Worm   558 L-FKATGKRGAVVSRSTYPSAGRYAGHWLGDNTARWEDLRTSVIGAQEFNLFGIPYVGSDVCGFI 621

  Fly   630 GNPDTELLERWYQTGAFLPFFRAHAHIDTKRREPWLFPERTRQVIQNAVIKRYSYLPLWYTAFYE 694
            |....||..||.|.|||..|||.|..|....::|.::|. .....:.|.:.||.|||..::..:.
 Worm   622 GTTTEELCLRWQQMGAFHSFFRNHNTIGAPAQDPAVWPS-VAAATKKANLFRYQYLPYLFSLHFT 685

  Fly   695 LELTGEPVIRPLLAQYPLDKEAFGVDNQLLVQDRLLVRPVMQQGVSKVDVYFPAIDDKKNGDWWY 759
            ..|:|..||||:..:||.|.|.|.:..:.:...|:||.||:.||.:.|:.|.|.       |.||
 Worm   686 ASLSGATVIRPVFFEYPTDAETFNLGYEFMWGSRILVAPVIYQGTTSVNAYLPT-------DRWY 743

  Fly   760 DVDTYQRQE--RSGYVSVPV-DDFKIPVWQRGGSIVPKKERQRRASTLMLHDPYTLIICLDRQGK 821
            .:..|:...  ..||.:||. ...:|||:.||.|::| ::.....:|....:|:.|:|.....|.
 Worm   744 SLFDYRYGSIMSPGYATVPAPTTSRIPVFVRGYSVIP-RQTPSITTTATRSNPFELLIAPCPLGM 807

  Fly   822 ASGSLYLDDEK-------SYAYRQGQRIHVNYEFAHDQLVN------SFVGKPKYKTLAWIERIV 873
            ..|:||.||.:       ||.|.|       ::|.::....      :...|....:|..::.|.
 Worm   808 GEGTLYWDDGETIVNDFNSYDYHQ-------FDFMYNSTATGGSVTITHSKKSSKISLPTLDIIE 865

  Fly   874 IAGLEKVPSSASITVNG 890
            |......|:..|.|:||
 Worm   866 IFNYPSAPNFRSFTING 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCS2alphaNP_652145.1 GH31_N 224..362 CDD:270212 26/142 (18%)
GH31_GANC_GANAB_alpha 362..833 CDD:269889 152/566 (27%)
DUF5110 809..877 CDD:465360 18/80 (23%)
aagr-2NP_494897.3 Trefoil 17..58 CDD:238059 2/6 (33%)
NtCtMGAM_N 69..176 CDD:465286 28/151 (19%)
GH31_N 175..287 CDD:270212 33/188 (18%)
GH31_MGAM_SI_GAA 287..687 CDD:269888 106/419 (25%)

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