DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIX6 and Six4

DIOPT Version :9

Sequence 1:NP_031400.2 Gene:SIX6 / 4990 HGNCID:10892 Length:246 Species:Homo sapiens
Sequence 2:NP_649256.1 Gene:Six4 / 40297 FlyBaseID:FBgn0027364 Length:392 Species:Drosophila melanogaster


Alignment Length:210 Identity:109/210 - (51%)
Similarity:148/210 - (70%) Gaps:10/210 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     6 ILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHGGNYREL 70
            :|.||..|:..:||.|::.||:|:|..||.|||.:    |....|||||||||:||::.|.:.||
  Fly   178 MLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPS----EFFKTNESVLRARAMVAYNLGQFHEL 238

Human    71 YHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCF 135
            |::||.|.|:.:.|..||.||.:|||:||||:||||||.|||||:|||:|||:||||||:..:||
  Fly   239 YNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGEETVYCF 303

Human   136 KERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQQQVLSQG 200
            ||::|:.|::.||.:.||.|.:|:.||:.||||.|||.|||||||||||....:..: ..||..|
  Fly   304 KEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTLTQVSNWFKNRRQRDRTPQQRPDI-MSVLPVG 367

Human   201 SGRALRAEGDGTPEV 215
                 :.:|:|.|.:
  Fly   368 -----QLDGNGFPRM 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIX6NP_031400.2 SIX1_SD 9..122 CDD:318970 62/112 (55%)
homeodomain 130..178 CDD:238039 24/47 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..246 6/26 (23%)
Six4NP_649256.1 SIX1_SD 181..290 CDD:293483 62/112 (55%)
homeodomain 301..355 CDD:238039 32/53 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0775
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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