DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17508 and nat2

DIOPT Version :10

Sequence 1:NP_652101.2 Gene:CG17508 / 49893 FlyBaseID:FBgn0039970 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_595156.1 Gene:nat2 / 2540058 PomBaseID:SPBC106.07C Length:167 Species:Schizosaccharomyces pombe


Alignment Length:150 Identity:37/150 - (24%)
Similarity:66/150 - (44%) Gaps:33/150 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 LFN---RRYYSTQSPMQNSSTKTPTGAKLSKSEQLKRAFKEYGAPIVAFHVGISLISLAGFYVLV 249
            |:|   ||..|:.|.:..||:..|   :|:.::::|...|:||...:..::|||::..:..:|||
pombe    23 LYNVPVRRSISSSSSIPPSSSPPP---RLTITQRVKELTKKYGWWSLGVYIGISVLDFSASFVLV 84

  Fly   250 SSGINLVPALECIGIASPAIV------------EKVATG----------STFVVAYAVHKVFAPA 292
            .:     ...|.||....:|:            |..|:|          :....||.:||....|
pombe    85 RT-----LGAERIGYLEHSILNSIRRYFNWEIPESTASGEPEAYHSSIWTELAFAYGIHKALVVA 144

  Fly   293 RISITLGSVPFVVRYIRSKK 312
            |:.:|...||.:.:..|..:
pombe   145 RVPLTAAIVPPLAKRFRGPR 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17508NP_652101.2 FAM210A-B_dom 217..303 CDD:429191 25/107 (23%)
nat2NP_595156.1 FAM210A-B_dom 52..155 CDD:429191 25/107 (23%)

Return to query results.
Submit another query.