Sequence 1: | NP_001178870.1 | Gene: | Myo7b / 498834 | RGDID: | 1561153 | Length: | 2152 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
Alignment Length: | 2035 | Identity: | 501/2035 - (24%) |
---|---|---|---|
Similarity: | 827/2035 - (40%) | Gaps: | 443/2035 - (21%) |
- Green bases have known domain annotations that are detailed below.
Rat 11 WLDPPSSNKTGVAIGGIVKETKLGKTLIEDDEGKEHWISAEDLSTLRPMHPNSAQGVDDMIRLGD 75
Rat 76 LNEAGVVHNLLIRYQQHKIYTYTGSILVAVNPFQMLPLYTLEQVQIYYSRHMGELPPHVFAIANS 140
Rat 141 CYFNMKKNKRDQCCIISGESGAGKTETTKLILQFLATVSGQHSW---------IEQQVLEANPIL 196
Rat 197 EAFGNAKTIRNDNSSRFGKYIDIHFNSSGVIEGASIEHFLLEKSRVCRQAAEERNYHIFYCMLMG 261
Rat 262 -------MSLEEKNMLGLGMPSEYHYLTMGNCTSYEGLSDAKDYAHVRSAMKILQFSDSENWDIS 319
Rat 320 KLLAAILHLGNVGFMAAVFENLDSSDVMETPAFPFAMKLLEVQHQALRDCLIKHTIPILGEFVSR 384
Rat 385 PLNIAQAADRRDAFVKGIYGHLFLWIVKKINAAIFTPQAQDPQNVRRAIGLLDIFGFENFQNNSF 449
Rat 450 EQLCINFANEHLQQFFVKHVFTMEQEEYLSENITWNYIHYTDNQPILDMLAL-----KPMSIISL 509
Rat 510 LDEESRFPQGTDVTMLQKLNSIHANNKS-FLRPK-------SIHDTRFGIAHFAGDVYYQAEGFL 566
Rat 567 EKNRDVLSTDILILIHSSKNKFLKEIF------NLDLPQTKLGHGTICQVKTKTGGQIFKPSDST 625
Rat 626 KRSVTLSSQFKQSLEQLMKILTNCQPYFVRCIKPNEYKKPLLFDRELCIQQLRYSGMMETVHIRK 690
Rat 691 SGFPIRYTFDEFSQRFRVLLPS-PERVQFQNKHRQMTSRIADLCLGTDKEWKMGKTKIFLKDHQD 754
Rat 755 TMLEIQRSQALDGAAIRIQRVLRGHKYRKEFLRQKRAAVTLQAVWRGHNQRKNFKL--------- 810
Rat 811 ----ILMGFERLQ-AIARSHLLMRQFQTM-------RQKIVQLQARC--------------RGYL 849
Rat 850 VRQQVQAKRRAVVIIQAH-------------ARGMVARKSYWQQKSSGPPVILAKEPKGQGVAL- 900
Rat 901 -----------DRKRKSIYDTVTDTAMV-------EKVFGFLPAMIGGQEGPAPTRFEDL-EVKT 946
Rat 947 ---QKLHEVDLDTVPM-------TEMPGEDVDGLAEYTFPKFAVTYFQKSASHTHIQKPLRYPLL 1001
Rat 1002 YHENDTDHSAALA----VWIIILRFMGDLPEPQAYGRSSLTGSSVMRQIHDRLDKDSVTQGPQHN 1062
Rat 1063 RSTQVASQ-QNIGEEVFKFDGPIS---------------------------DRPMSNLEKVHFIV 1099
Rat 1100 GYAIMRPGLRDEIYCQICKQLSENYKTSSRARGWILLSLCLGCFPPSERFMKY-LLNFISQG--- 1160
Rat 1161 ---PASYGPFCAERLQRTFANGVRAEPPTWLELQAVKSKKHIPIQVILATGRSLT--------IS 1214
Rat 1215 VDSASTSREICQQIAQKQGLRDKLGFSLQVAVYD-----------------KFWSLGNSCDHVMD 1262
Rat 1263 AVAQCEQLAWERGESQRQAPWRIYFRKEFFTPWHDSREDPVSTELIYHQVLRGVWSGEYNFE--- 1324
Rat 1325 KEEDLVELLARHCYVQLGATVKSNAVQELLPSCVPSKLYRTKSPEKWASLVIAAHAKAPYTQSKA 1389
Rat 1390 TPLEVKEQTVEAARLLWPLLFSRLFEVTTLSGP--RLPKTQLILAINWKGMYFLDQKERTLL--- 1449
Rat 1450 GLSFAEVMGLIANRDAPGGKSL--------LLSTLHEEYEFASPSSVAIAEMVALFLAGLKERSV 1506
Rat 1507 FAMALQDRKATDDVTLLPFKKGDLLILTKKQGLLASENWVLG-QNDRTGKTGLVPTACLYTIPSV 1570
Rat 1571 TKPSAQLLNLLAMSPEKRKLAAQEVQASEPPLEEQLTELPYTLEEFSYQYFRAPEKETISRAAMP 1635
Rat 1636 MARSRGHLWAYSPEPLRQPLLKSVHDKAKLRDSACQIFLAILKYTGDYPSRQSWHSL-------- 1692
Rat 1693 ELTDQMFSLALKEPALQDELYCQILKQLTH-------NSIRFSEERAWQLLWLCTGLFPPGKALL 1750
Rat 1751 PHAQKFIDSRKK-----KPLALDCSRRLHRILRVGPRKQPPHHVEVKAAEQNVSKLHHEV----Y 1806
Rat 1807 LPNDTNKTLEVSSSSRVRDL 1826 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myo7b | NP_001178870.1 | MYSc | 60..761 | CDD:214580 | 275/736 (37%) |
MYSc_Myo7 | 79..750 | CDD:276832 | 269/706 (38%) | ||
IQ | 787..809 | CDD:197470 | 7/21 (33%) | ||
MyTH4 | 991..1194 | CDD:214535 | 31/241 (13%) | ||
B41 | 1201..1414 | CDD:214604 | 40/240 (17%) | ||
FERM_B-lobe | 1304..1405 | CDD:271216 | 16/103 (16%) | ||
FERM_C1_MyoVII | 1408..1504 | CDD:270019 | 18/108 (17%) | ||
SH3 | 1505..1565 | CDD:302595 | 8/60 (13%) | ||
MyTH4 | 1646..1793 | CDD:214535 | 32/166 (19%) | ||
B41 | 1802..2014 | CDD:214604 | 8/29 (28%) | ||
FERM_M | 1912..2014 | CDD:278785 | |||
FERM_C2_MyoVII | 2010..2105 | CDD:270020 | |||
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 9/37 (24%) |
MYSc | 81..777 | CDD:214580 | 275/737 (37%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 269/706 (38%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 198/1181 (17%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | 67/346 (19%) | ||
ATP-synt_B | <1671..1771 | CDD:304375 | 24/135 (18%) | ||
TMPIT | 1739..>1825 | CDD:285135 | 20/92 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |