DRSC/TRiP Functional Genomics Resources

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Protein Alignment OPHN1 and rga4

DIOPT Version :10

Sequence 1:NP_002538.1 Gene:OPHN1 / 4983 HGNCID:8148 Length:802 Species:Homo sapiens
Sequence 2:NP_595756.1 Gene:rga4 / 2540593 PomBaseID:SPBC28E12.03 Length:933 Species:Schizosaccharomyces pombe


Alignment Length:556 Identity:137/556 - (24%)
Similarity:222/556 - (39%) Gaps:124/556 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    52 NYSSAVQKFSQTLQSFQFDFIGDTLTDDEINIAESFKEFAELLNEVENERMMMVHNASDLLIKPL 116
            |.||.| :.|....|..||...::..:..|.|:|...|...||.|..:...::.....   :.| 
pombe   458 NRSSLV-RASDVFTSNVFDATEESANELAIRISELQAEVGTLLLEATSLASIIEQQTP---VSP- 517

Human   117 ENFRKEQIGFTKER----KKKFEKDGERFYSLLDRHLHLSSKKKESQLQEADLQVDKER------ 171
            |.|::|.:.....|    :|.|:.:   ..:||.|...||:  ..|:||.|...|.:|.      
pombe   518 EAFKQELVADLNYRLDYLRKSFQPE---LSTLLLRRDALST--TVSKLQNAYSTVMEETAYLNVK 577

Human   172 -------HNFFESSLDYVYQIQEVQESKKFNIVEPVLAFLHSLFISNSLTVELTQDFLPYKQQLQ 229
                   :|..|..|.|   ::|.|..|:.:         .|..|.|:          ..|....
pombe   578 NTELVSLNNQLERELAY---LREQQHKKRTS---------SSFGIFNN----------DKKSNRT 620

Human   230 LSLQNTRNHFSSTREEMEELKKRMKEAPQTCKLPGQPTIEGYLYTQEKWALGISWVKYYCQYEKE 294
            :|..:.|..||..:.....|..|.|:...  |..|     ||.....|..|..|:.|.: .::::
pombe   621 ISTPSPRESFSRLQMVASSLGFRPKDNKD--KESG-----GYNKRNSKIDLKKSFSKRF-HWKRD 677

Human   295 TKTLTMTPM---EQKPGAKQ-------GPLDLTLKY----------CVRRKTESIDKRFCFDIET 339
            :..::.||.   |.....:|       |...|..||          ||   :.:||::  :..:.
pombe   678 SPHMSSTPSISEEHLASEEQEDFVPAVGHCKLCGKYSNELRAHYQDCV---SSTIDRQ--YQSKK 737

Human   340 NERPGTITLQALSEANRRLWMEAMDGKEPIYHSPITKQQEMELNEVGFKFVRKCINIIETKGIKT 404
            :|.|              :|....|..:         |..:.|..|....| .|||.||:.|:..
pombe   738 SESP--------------VWALNPDDFD---------QNRLTLLRVPTLIV-SCINFIESYGMDF 778

Human   405 EGLYRTVGSNIQVQKLL------NAFFDPKCPGDVDFHNSDWDIKTITSSLKFYLRNLSEPVMTY 463
            |||||..|:..|::|::      :...||           ..||..:||..|.|||||..|::||
pombe   779 EGLYRKSGATSQMKKIVALLRNEDTVLDP-----------SEDISAVTSVFKQYLRNLPNPIITY 832

Human   464 RLHKELVSAAKSDNLDYRLGAIHSLVYKLPEKNREMLELLIRHLVNVCEHSKENLMTPSNMGVIF 528
            ..:...::||...:...:|.....::..||..:.|:|:|:||||..|..:|..|.||..|:.|:|
pombe   833 DQYFPFITAANCASFQDKLDGFIMVIKSLPPAHAEILQLIIRHLARVAAYSHANRMTSKNLAVVF 897

Human   529 GPTLMRAQEDTVAAMMNIKFQNIVVEILIEHFGKIY 564
            .|||:| ..|....::::..:|..:..||:|..:::
pombe   898 SPTLIR-DPDNSRDVIDMTVKNYSLAFLIDHVHEVF 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OPHN1NP_002538.1 BAR_OPHN1 19..225 CDD:153317 43/189 (23%)
BAR-PH_GRAF_family 267..370 CDD:269953 22/122 (18%)
RhoGAP_Graf 363..559 CDD:239839 62/201 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 569..588
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 607..666
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..770
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 783..802
rga4NP_595756.1 LIM 24..78 CDD:259829
CENP-H 543..>606 CDD:461756 18/76 (24%)
RhoGAP 759..928 CDD:214618 59/181 (33%)
Blue background indicates that the domain is not in the aligned region.

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