DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycK and CCNL2

DIOPT Version :10

Sequence 1:NP_788082.1 Gene:CycK / 49816 FlyBaseID:FBgn0025674 Length:400 Species:Drosophila melanogaster
Sequence 2:XP_011540518.1 Gene:CCNL2 / 81669 HGNCID:20570 Length:553 Species:Homo sapiens


Alignment Length:492 Identity:113/492 - (22%)
Similarity:172/492 - (34%) Gaps:157/492 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CWYYDKKELRETPSILDGISFETERRYRKEGARFIMECGTKMGLGHNTMATGVVYFHRFYMFHSF 67
            |...|.| ||.|||:..|:..:||...|..|...|...|..:.|....||||.|.|.||:...||
Human    52 CLLPDDK-LRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSF 115

  Fly    68 -----------RSFPR----YVTACC------------------------------CLFFAGKVE 87
                       |...|    ...|||                              |:......|
Human   116 VKHSMEPSSLWRPSGRRGWGQTWACCNASASACVNGLCPPGFQDRRGPKTHTGRHQCVSPPSTAE 180

  Fly    88 ETPKKCRDIIKTARGILTDNYFYSFGDDPKEEVMTLERILLQTIKFDLQVEHPYTFLLKYAKCFK 152
            .....|....:....:|.|..:.:.    |.:::..||.:|:.:.|.:.|:||:..::.|.:..:
Human   181 RQKTLCSLSGRKPVPLLLDQDYVNL----KNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLE 241

  Fly   153 GDQQKLQKMVQMAWNFVNDSLSTVVCLQWEPEIIAVALIHLASKLSKFTVQDWEGRQPQQQRWWD 217
            .::.  |.:||.:||::||||.|.|.::::||.||.|.|:||::..:..:       |.:..|:.
Human   242 CERN--QHLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPL-------PNRPHWFL 297

  Fly   218 MFVSDVTMEILEDICHQVLDLY-----------------------QSTQKEALQP--------TS 251
            :|  ..|.|.:::||.::|.||                       ...|...|.|        ||
Human   298 LF--GATEEEIQEICLKILQLYARKKVDLTHLEGEVEKRKHAIEEAKAQARGLLPGGTQVLDGTS 360

  Fly   252 PPQKPPSRADSPKSGKLTNSTGIGPLSVPQQPPPPVCGNGGVLEVSN----IQSIKSLASGVPII 312
            .....|...:|||.||            ..:|.|        |.|.|    ::..|...:..|:.
Human   361 GFSPAPKLVESPKEGK------------GSKPSP--------LSVKNTKRRLEGAKKAKADSPVN 405

  Fly   313 G-----------PSDSQNLLQGPTPPGQP------SGYHIYHAPPPPPPPVVPMPPYPSSGWGVQ 360
            |           .|..|:..:.|:....|      ||                    .:||....
Human   406 GLPKGRESRSRSRSREQSYSRSPSRSASPKRRKSDSG--------------------STSGGSKS 450

  Fly   361 QTVVGHYSGSAAPPPPMPPSLPPGASGYYNAGGRPSQ 397
            |:  ...|.|.:||...|.|.|  ..|....|.|.|:
Human   451 QS--RSRSRSDSPPRQAPRSAP--YKGSEIRGSRKSK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycKNP_788082.1 CYCLIN_CCNK_rpt1 20..134 CDD:410233 32/158 (20%)
CYCLIN_CCNK_rpt2 138..239 CDD:410234 30/100 (30%)
CCNL2XP_011540518.1 CYCLIN_SF 35..223 CDD:477360 40/175 (23%)
CYCLIN_CCNL2_rpt2 228..350 CDD:410296 34/132 (26%)

Return to query results.
Submit another query.