DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht4 and AT4G19820

DIOPT Version :9

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001320000.1 Gene:AT4G19820 / 827726 AraportID:AT4G19820 Length:368 Species:Arabidopsis thaliana


Alignment Length:376 Identity:101/376 - (26%)
Similarity:175/376 - (46%) Gaps:53/376 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KLVSIWALAALCLCLGQVASSEKLLNC-YWGTWANYRPGDGKFTPSD-----IDPSLCTHISYTF 60
            ||:||....:|.|   :.:|::.::.. ||            |..|:     ||.||.||:...|
plant     5 KLISITFFLSLLL---RFSSAQTVVKATYW------------FAESESPLAQIDSSLFTHLFCAF 54

  Fly    61 FGISDAGEFKSLDTWLDMDDGLGFISQTIALKQRNPNLKILAVVGGWNEGSTKYSAMAADPAKRA 125
            ..|:..    :....:...:...|.:.|..:::|||.:|.|..:||....:..:::||::|..|.
plant    55 ADINTL----TYQVIVSSRNKPKFSTFTQTVRRRNPTVKTLLSIGGDFTYNFAFASMASNPTSRK 115

  Fly   126 TFVSTSLAFIQQYSFDGLDLDWEYPGQRGGSEADRENFVTLLREIKETYDQYG-------LELGI 183
            .|:|:|:...:...|.||||:|:||    ....:.:||..||||.:...:...       |.|..
plant   116 LFISSSIKLARSCGFHGLDLNWKYP----SITTEMDNFGKLLREWRLAVEAEARSSGKPRLLLTA 176

  Fly   184 AVGASEKSASISYDIPAISQHLTFINVMTYDFHMALDGYLGLN-APL-------PEVAESIDYWL 240
            ||..|....|:.:.:.|::..|.::|::.|||:.:....:..: |||       |.....:..|.
plant   177 AVFYSYSYYSVLHPVNAVADSLDWVNLVAYDFYESGSSRVTCSPAPLYDPITTGPSGDAGVRAWT 241

  Fly   241 SHGAPAEKLILGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEI---CLNNWQT 302
            ..|.||:|.:||...||:::.::|:..:...|...||..:     .:|.:||.:|   .::|..|
plant   242 QAGLPAKKAVLGFPLYGYAWCLTDAKNHNYYANSSGPAIS-----PDGSIGYDQIRRFIVDNKAT 301

  Fly   303 -VFDQENGAPYAFQGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDD 352
             |::......|.:....|||||:.:||.:|::..:.|.|.|...|.|..||
plant   302 MVYNSNLVQNYCYAKKTWIGYDDNQSIVMKVKYAKQRGLLGYFSWHIGADD 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 94/352 (27%)
Glyco_18 28..351 CDD:214753 92/347 (27%)
CBM_14 421..462 CDD:279884
AT4G19820NP_001320000.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 188 1.000 Domainoid score I962
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1632
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D826687at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 1 1.000 - - mtm1002
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.980

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