DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht4 and ChiC

DIOPT Version :10

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_193716.1 Gene:ChiC / 827725 AraportID:AT4G19810 Length:379 Species:Arabidopsis thaliana


Alignment Length:386 Identity:111/386 - (28%)
Similarity:180/386 - (46%) Gaps:63/386 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KLVSIWALAALCLCLGQVASSEKLLNC-YWGTWANYRPGDGKFTPSDIDPSLCTHISYTF----- 60
            ||:|:.......|.| |.:.::.::.. ||      .|. .:|..:|||.||.||:...|     
plant     5 KLISLIVSITFFLTL-QCSMAQTVVKASYW------FPA-SEFPVTDIDSSLFTHLFCAFADLNS 61

  Fly    61 ----FGISDAGEFKSLDTWLDMDDGLGFISQTIALKQRNPNLKILAVVGGWNEGSTKYSAMAADP 121
                ..:|.|.:.|             |.:.|..:::|||::|.|..:||.....|.|::||::|
plant    62 QTNQVTVSSANQPK-------------FSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMASNP 113

  Fly   122 AKRATFVSTSLAFIQQYSFDGLDLDWEYPGQRGGSEADRENFVTLLREIK-------ETYDQYGL 179
            ..|.:|:.:|:...:.|.|.|||||||||    .|..:..||.|||||.:       .:..:..|
plant   114 TSRKSFIDSSIRVARSYGFHGLDLDWEYP----SSATEMTNFGTLLREWRSAVVAEASSSGKPRL 174

  Fly   180 ELGIAVGASEKSASISYDIPAISQHLTFINVMTYDFHMALDGYLGLNAPL----------PEVAE 234
            .|..||..|....|:.|.:.|::..|.::|:|.|||:.  .|:..:..|.          |....
plant   175 LLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYG--PGWSRVTGPPAALFDPSNAGPSGDA 237

  Fly   235 SIDYWLSHGAPAEKLILGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHE----I 295
            ....|:..|.||:|.:||..:||:::::::::.:    :...| |.|.....:|.:||.:    |
plant   238 GTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSH----SYYAP-TTGAAISPDGSIGYGQIRKFI 297

  Fly   296 CLNNWQTVFDQENGAPYAFQGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDDFRGL 356
            ..|...||::......|.:.|..|||||:.:||..|::..:.|.|.|...|.:..||..||
plant   298 VDNGATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 105/362 (29%)
CBM_14 420..462 CDD:426342
ChiCNP_193716.1 GH18_plant_chitinase_class_V 25..359 CDD:119358 105/365 (29%)
Blue background indicates that the domain is not in the aligned region.

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