DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht4 and AT4G19800

DIOPT Version :9

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_193715.1 Gene:AT4G19800 / 827724 AraportID:AT4G19800 Length:398 Species:Arabidopsis thaliana


Alignment Length:360 Identity:107/360 - (29%)
Similarity:167/360 - (46%) Gaps:54/360 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VASSEKLLNCYWGTWANYRPGDGKFTPSDIDPSLCTHISYTFFGISDAGEFKSLDTWLDMDDGLG 83
            ::.|:.:...||     :...|  |..:|||.||.||:..||..:.......::.||    :...
plant     1 MSESDVVKASYW-----FPATD--FPATDIDSSLFTHLFCTFADLEAESYEITIATW----NQAP 54

  Fly    84 FISQTIALKQRNPNLKILAVVGGWNEGSTKYSAMAADPAKRATFVSTSLAFIQQYSFDGLDLDWE 148
            |.:.|..::||||::|.|..:||.|.....:::||::|..||:|:.:::...:.|.|.|||||||
plant    55 FHAFTETVQQRNPHVKTLLSIGGGNADKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWE 119

  Fly   149 YPGQRGGSEADRENFVTLLREIKETYD-------QYGLELGIAVGASEKSASISYDIPAISQHLT 206
            ||    .:|.:..:|..||.|.:...:       ...|.|..||..|.....:.|.:.|||..|.
plant   120 YP----RNEEEMYDFGKLLEEWRSAVEAESNSSGTTALILTAAVYYSSNYQGVPYPVLAISNSLD 180

  Fly   207 FINVMTYDFHMALDGYLGLNAP-----LPEVAESIDY----WLSHGAPAEKLILGIGFYGHSYQM 262
            :||:|.|||:.  .|:..:..|     ||....|.|.    |...|.||:|.:||..:||.::.:
plant   181 WINLMAYDFYG--PGWSTVTGPPASLYLPTDGRSGDSGVRDWTEAGLPAKKAVLGFPYYGWAWTL 243

  Fly   263 SDSSQNWPGAACIGPGTAGVYTRENGFLGYHEICLNNWQTVFDQENGA----------PYAFQGD 317
            :|...|...|...||..:     ::|.:.|.:  |..|..    :|||          .|.:.|.
plant   244 ADPDVNGYDANTTGPAIS-----DDGEISYRQ--LQTWIV----DNGATKVHDDMMVGDYCYAGT 297

  Fly   318 QWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDD 352
            .|||||:.:||..|:...:.:.|.|...|.:..||
plant   298 TWIGYDSEKSIVTKVIYAKQKGLLGYFSWHVGGDD 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 106/353 (30%)
Glyco_18 28..351 CDD:214753 104/348 (30%)
CBM_14 421..462 CDD:279884
AT4G19800NP_193715.1 GH18_plant_chitinase_class_V 4..337 CDD:119358 107/357 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 188 1.000 Domainoid score I962
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1632
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D826687at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 1 1.000 - - mtm1002
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.980

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