DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht4 and AT4G19760

DIOPT Version :9

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_193711.2 Gene:AT4G19760 / 827720 AraportID:AT4G19760 Length:369 Species:Arabidopsis thaliana


Alignment Length:364 Identity:94/364 - (25%)
Similarity:160/364 - (43%) Gaps:63/364 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ANYRPGDGKF---------TPSD-IDPSLCTHISYTFFGISDAGEFKSLDTWLDMDDGLGFISQT 88
            |:|...|||.         |||. ||.:|.||:...|..:..:    :.:..:...:...|.|.|
plant    16 ASYWFPDGKSQSPECLSQGTPSSFIDSTLFTHLFCAFADVDSS----THEVTISAANSYQFSSFT 76

  Fly    89 IALKQRNPNLKILAVVGGWNEGSTKYSAMAADPAKRATFVSTSLAFIQQYSFDGLDLDWEYPGQR 153
            ..:|::|.:::.|..:||.:......::||::...|..|:.:|:...::..|.||||.||||   
plant    77 ETVKEKNTDVQTLLSIGGKDADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWEYP--- 138

  Fly   154 GGSEADRENFVTLLRE-----IKET--YDQYGLELGIAVGASEKSASISYDIPAISQHLTFINVM 211
             .::.:..||..||.|     ::|:  .:|..|.|..||..|.:...:.|.:.||:.:|.|:|:|
plant   139 -SNDVEMTNFGKLLEEWRAAVVEESDKTNQLPLLLTAAVYYSPQYDGVEYPVKAIADNLDFVNIM 202

  Fly   212 TYDFHMALDGYLGLNAPLPEVA-------------ESIDYWLSHG-APAEKLILGIGFYGHSYQM 262
            .|||:.  .|:..:..| |...             ..:..||... .|.:|.:||..:.|.::.:
plant   203 AYDFYG--PGWSPVTGP-PAALFHDPSNPAGRSGNSGLRKWLDEAKLPPKKAVLGFPYCGWAWTL 264

  Fly   263 SDSSQNWPGA----ACIGPGTAGVYTR------ENGFLGYHEICLNNWQTVFDQENGAPYAFQGD 317
            .|:..|...|    |.|.|..:..|.:      :||...:|:..:..:           |.:.|:
plant   265 EDAENNGYDAATDGAAISPDGSITYAKIRNYIVDNGAATFHDPAVIGF-----------YCYVGN 318

  Fly   318 QWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDDFRGL 356
            .|||||:.:||..|::..:...|.|...|.:..|...||
plant   319 TWIGYDDNQSIVYKVKYAKFTGLLGYFSWHVGADYNCGL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 94/364 (26%)
Glyco_18 28..351 CDD:214753 91/357 (25%)
CBM_14 421..462 CDD:279884
AT4G19760NP_193711.2 GH18_plant_chitinase_class_V 11..358 CDD:119358 94/364 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 188 1.000 Domainoid score I962
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1632
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D826687at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 1 1.000 - - mtm1002
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X91
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.980

Return to query results.
Submit another query.