DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht4 and Ctbs

DIOPT Version :9

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_112285.1 Gene:Ctbs / 81652 RGDID:621338 Length:367 Species:Rattus norvegicus


Alignment Length:358 Identity:80/358 - (22%)
Similarity:132/358 - (36%) Gaps:94/358 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DPSLCT----HISYTFFGISDAGEFKSLDTWLDMDDGLGFISQTIALKQRNPNLKILAVVGGWNE 109
            :.|||.    |..:..| :.|.|:    .||...|     .||          :..:||.|.::.
  Rat    30 EASLCRPIRHHRDFEVF-VFDVGQ----KTWKSYD-----WSQ----------ITTVAVFGKYDS 74

  Fly   110 GSTKYS-------AMAAD--------PAKRATFVSTSLAFIQQYSFDGLDLDWEYPGQRGGSEAD 159
            ....|:       .:..|        |..||::::..:|..:....||:::|.|.  :...|..:
  Rat    75 ELMCYAHSKGARVVLKGDVALKDIINPTFRASWIAQKVALAKAQHMDGINIDIEQ--EVDCSSPE 137

  Fly   160 RENFVTLLREIKETYDQ--YGLELGIAVGASEKSA-SISYDIPAISQHLTFINVMTYDFHMAL-- 219
            .|....|:||..|.:.:  .|.::...|..|.|.. ...|:...|:....|:.||:||....:  
  Rat   138 YEALTALVRETTEGFHREIEGSQVTFDVAWSPKGIDKRCYNYTGIADACDFLFVMSYDEQSQIWS 202

  Fly   220 DGYLGLNAPLPEVAESIDYWLSHGAPAEKLILGIGFYGHSYQMSDSSQN---------WPGAACI 275
            :.....|||..:.......:|..|....||::||.:||:.|...:.|::         :.||.| 
  Rat   203 ECIAAANAPYNQTLTGYGDYLRMGISPRKLVMGIPWYGYDYICLNLSKDDVCAIAKVPFRGAPC- 266

  Fly   276 GPGTAGVYTRENGFLGYHEICLNNWQTVFDQENGAPYAFQGDQW--------------------I 320
             ...||           |::   .::.:..|.|.   :..|.||                    :
  Rat   267 -SDAAG-----------HQV---PYRVIMKQVNS---SVSGSQWNQDQQAPYYNYKDPTGRLHQV 313

  Fly   321 GYDNPESIQLKMQLVESRNLGGAMMWSIETDDF 353
            .||||.||.||...|:...|.|..||:....|:
  Rat   314 WYDNPRSISLKAAFVKHYGLRGIGMWNANCLDY 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 80/358 (22%)
Glyco_18 28..351 CDD:214753 79/354 (22%)
CBM_14 421..462 CDD:279884
CtbsNP_112285.1 GH18_chitobiase 23..363 CDD:119354 80/358 (22%)
Glyco_18 <100..343 CDD:214753 62/263 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D826687at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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