DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht4 and chia

DIOPT Version :9

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001186489.1 Gene:chia / 548404 XenbaseID:XB-GENE-5868468 Length:482 Species:Xenopus tropicalis


Alignment Length:503 Identity:192/503 - (38%)
Similarity:264/503 - (52%) Gaps:76/503 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LAALCLCLGQVASSEKLLNCYWGTWANYRPGDGKFTPSDIDPSLCTHISYTFFGISDAGEFKSLD 73
            |..|.|.|.....|...|.||:..||.||||.|||.|.:|||.||||:.|.|.|:|: .:..:::
 Frog     7 LVGLALVLNAQLGSAYELTCYFTNWAQYRPGLGKFKPDNIDPCLCTHLIYAFAGMSN-NQITTIE 70

  Fly    74 TWLDMDDGLGFISQTIALKQRNPNLKILAVVGGWNEGSTKYSAMAADPAKRATFVSTSLAFIQQY 138
             |.|:.    ..|....||.:|.|||.|..:||||.|:..::||.|....|.||:|:.:.|::||
 Frog    71 -WNDVT----LYSSFQNLKNQNGNLKTLLAIGGWNFGTAPFTAMVATAQSRQTFISSVIKFLRQY 130

  Fly   139 SFDGLDLDWEYPGQRGGSEADRENFVTLLREIKETYDQYG-------LELGIAVGASEKSASISY 196
            .|||||.||||||.||....|::.|.||::|:...::...       |.:..||.|...:....|
 Frog   131 GFDGLDFDWEYPGSRGSPPQDKQLFTTLVQEMLAAFEAEASQSNKPRLMVTAAVAAGISNIESGY 195

  Fly   197 DIPAISQHLTFINVMTYDFHMALDGYLGLNAPL---P---------EVAESIDYWLSHGAPAEKL 249
            .||.:||.|.:|:|||||.|.:.:||.|.|:||   |         .|...::|||::||||.||
 Frog   196 QIPQLSQALDYIHVMTYDLHGSWEGYTGENSPLYTNPSATGYNAYLNVDYVMNYWLNNGAPASKL 260

  Fly   250 ILGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEIC-------LNNWQTVFDQE 307
            |:|...|||::.:|:.|.|..||...|.|.||.|||:.||..|:|||       .|.|.:..|  
 Frog   261 IVGFPTYGHTFILSNPSNNGIGAPTSGNGPAGPYTRQAGFWAYYEICTFLKNGATNLWSSAED-- 323

  Fly   308 NGAPYAFQGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDDFRG-LCGE-SYPLLKTMNRA 370
              .|||:||.:|:||||.:|.|:|.:.:...||||||:|:|:.|||.| .|.: .:||:.|:...
 Frog   324 --VPYAYQGSEWLGYDNEKSFQIKAEWLMKNNLGGAMVWAIDLDDFTGTFCNQGKFPLINTLKNT 386

  Fly   371 LGREVSG------------------GSGGGGGGGGEGSVTPAPTAAPTSSPTPAPTPGGGSGGNE 417
            ||.:.||                  .||.|.|..|.||                 :.||.|||:.
 Frog   387 LGVQASGCTPPATPVAPVTAAPATVPSGSGSGSSGSGS-----------------SSGGSSGGSG 434

  Fly   418 -CA--QDGFFVLESDCNKFYQCVGGVRYDFQCGAGLCFNTITLNCDWP 462
             ||  ..|.:.:..:.|.|:.|:.|:.|...|..||.|:.....|:||
 Frog   435 FCAGKASGLYPVAGNTNAFWHCLNGITYQQHCQTGLVFDPSCECCNWP 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 156/372 (42%)
Glyco_18 28..351 CDD:214753 147/348 (42%)
CBM_14 421..462 CDD:279884 11/40 (28%)
chiaNP_001186489.1 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 156/372 (42%)
Glyco_18 26..365 CDD:214753 147/348 (42%)
CBM_14 436..482 CDD:279884 13/45 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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