DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht4 and chit1

DIOPT Version :9

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001005792.1 Gene:chit1 / 448265 XenbaseID:XB-GENE-5801457 Length:492 Species:Xenopus tropicalis


Alignment Length:491 Identity:167/491 - (34%)
Similarity:247/491 - (50%) Gaps:80/491 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LNCYWGTWANYRPGDGKFTPSDIDPSLCTHISYTFFGISDAGEFKSLDTWLDMDDGLGFISQTIA 90
            |.||:..|:.|||...|:.|.:|||.||||:.|.|..::.    ..:..:...||.|  ..|..|
 Frog    24 LVCYFTNWSQYRPEPAKYMPGNIDPKLCTHLIYAFATMNS----NKIAPYEWNDDVL--YKQYNA 82

  Fly    91 LKQRNPNLKILAVVGGWNEGSTKYSAMAADPAKRATFVSTSLAFIQQYSFDGLDLDWEYPGQRGG 155
            |||:||||..|..:||||.|:.|::.|.:....|..|:.:.:.:::.|.|:|:|||:||||.||.
 Frog    83 LKQQNPNLVTLLAIGGWNFGTQKFTEMVSSAGNRKIFIDSVIEYLRLYGFNGIDLDFEYPGSRGS 147

  Fly   156 SEADRENFVTLLREIKETYD-------QYGLELGIAVGASEKSASISYDIPAISQHLTFINVMTY 213
            ...|:..|..|.:|:.:.::       |..|.:..||.|.:.:....|:|..|.:.|.||:||||
 Frog   148 PPEDKHRFTILTQEMLKAFEDEAAATNQSRLLMTAAVSAGKGTIDAGYEIAEIGKTLDFISVMTY 212

  Fly   214 DFHMALDGYLGLNAPLPE------------VAESIDYWLSHGAPAEKLILGIGFYGHSYQMSDSS 266
            |||...|...|.|:||.:            :..:::||..:|.||:||::|...||.:::..:.|
 Frog   213 DFHGGWDPVSGHNSPLCKGSKDTGDFQYFNIRYAMNYWKDNGVPAQKLLIGFPTYGRTFRNPNPS 277

  Fly   267 QNWPGAACIGPGTAGVYTRENGFLGYHEIC------LNNWQTVFDQENGAPYAFQGDQWIGYDNP 325
            ....|....|.|:||.||||.||..|:|||      ..||  :.||:  .|||.:|::|:|:||.
 Frog   278 NCDVGIPVSGAGSAGQYTREAGFWAYYEICTWLSGTTINW--IADQK--VPYACKGNEWVGFDNQ 338

  Fly   326 ESIQLKMQLVESRNLGGAMMWSIETDDFRG-LCGE-SYPLLKTMNRALGREVSGGSGGGGGGGGE 388
            :|.:.|::.::.....|||:|:|:.|||.| .|.: .|||:..:...|                |
 Frog   339 DSYECKVKFLKESGFAGAMVWAIDLDDFSGTFCNQGKYPLISHLKSLL----------------E 387

  Fly   389 GSVTPAP----TAAPTSSPTPA-----------PTPG-----GGSGGNE-----CA--QDGFFVL 426
            ||||..|    ...||..|:|.           ||||     ..:.|:|     ||  .||.:..
 Frog   388 GSVTKCPGNPCDIVPTEPPSPTTSGETTTSQAKPTPGETTTSTTTSGDEVDPNFCAGKSDGLYEN 452

  Fly   427 ESDCNKFYQCVGGVRYDFQCGAGLCFNTITLNCDWP 462
            ..:.|:||.|.||..|..:|..||.|:.....|:||
 Frog   453 RINFNRFYICAGGSTYPMKCADGLVFDEACKCCNWP 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 132/371 (36%)
Glyco_18 28..351 CDD:214753 123/347 (35%)
CBM_14 421..462 CDD:279884 14/40 (35%)
chit1NP_001005792.1 GH18_chitolectin_chitotriosidase 24..386 CDD:119351 132/371 (36%)
CBM_14 442..491 CDD:366726 18/47 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 306 1.000 Inparanoid score I2597
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.980

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