DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht4 and chia.6

DIOPT Version :10

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_955897.2 Gene:chia.6 / 322420 ZFINID:ZDB-GENE-030131-1140 Length:480 Species:Danio rerio


Alignment Length:498 Identity:174/498 - (34%)
Similarity:255/498 - (51%) Gaps:75/498 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALCLCLGQVASSEKLLNCYWGTWANYRPGDGKFTPSDIDPSLCTHISYTFFGISDAGEFKSLDTW 75
            :|.||...:||.   |.||:..|:.|||..||:.||::||.||||:.|.|..|::..:..:.: |
Zfish    11 SLALCHFGLASQ---LVCYFTNWSQYRPDVGKYMPSNVDPHLCTHLIYAFSIINNENKLTTYE-W 71

  Fly    76 LDMDDGLGFISQTI-----ALKQRNPNLKILAVVGGWNEGSTKYSAMAADPAKRATFVSTSLAFI 135
            .|         :|:     .|||.|||||.|..|||||.|:|::|:|.:.|..|.||:.:|:.|:
Zfish    72 ND---------ETLYQSFNGLKQSNPNLKTLLAVGGWNFGTTQFSSMVSTPQNRQTFIQSSITFL 127

  Fly   136 QQYSFDGLDLDWEYPGQRGGSEADRENFVTLLREIKETYDQYG-------LELGIAVGASEKSAS 193
            :.:.||||||||||||.||....|::.|..|.:|:.|.|....       |.|..||.|.:.:..
Zfish   128 RTHGFDGLDLDWEYPGSRGSPPEDKQRFTLLCKELVEAYQAESAATGRPRLMLTAAVAAGKGNID 192

  Fly   194 ISYDIPAISQHLTFINVMTYDFHMALDGYLGLNAPL----PEVAESI--------DYWLSHGAPA 246
            ..|:|..|:::|.|||:||||||.:.:...|.|:||    .::.:.|        .||...|||.
Zfish   193 AGYEIAEIAKYLDFINIMTYDFHGSWESVTGHNSPLYRGSGDIGDKIYYNTDFAMTYWRDQGAPV 257

  Fly   247 EKLILGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEICL----NNWQTVFDQE 307
            |||.:|...||.::::| |:.:..||...|..:||.||||.||..|:|||.    ...|.:.||:
Zfish   258 EKLRMGFAAYGRTFRLS-SAVSGVGAPASGAASAGTYTREAGFWSYYEICTFLKQATVQQIVDQK 321

  Fly   308 NGAPYAFQGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDDFRG-LCGES-YPL---LKTM 367
              .|||.:|.:|:|:||.||.:.|:..::.:..|||.:|:::.|||.| .||:| |||   |:|:
Zfish   322 --VPYATKGQEWVGFDNMESYKTKVDYLKEKGFGGAFVWALDLDDFSGQFCGQSKYPLIGQLRTL 384

  Fly   368 NRALGREVSGGSGGGGGGGGEGSVTPAPTAAPTSSPT-----------PAPTPGGGSGGNECA-- 419
            ......|....             .|:.|..|:..||           |...|...||.:.|.  
Zfish   385 LNINNTEFPYN-------------PPSTTVKPSGRPTRASATVPYATRPPVVPTAPSGSDFCTGK 436

  Fly   420 QDGFFVLESDCNKFYQCVGGVRYDFQCGAGLCFNTITLNCDWP 462
            .:|.:...:|...:..|..|..:..:|.|...|:.....|:||
Zfish   437 LEGIYEYPADSMIYIHCANGRTFIQRCPAKTVFDPDCKCCNWP 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 148/377 (39%)
CBM_14 420..462 CDD:426342 8/41 (20%)
chia.6NP_955897.2 GH18_chitolectin_chitotriosidase 23..385 CDD:119351 148/374 (40%)
CBM_14 433..480 CDD:426342 11/47 (23%)

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