DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht4 and chil-27

DIOPT Version :10

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_496035.1 Gene:chil-27 / 188616 WormBaseID:WBGene00011848 Length:407 Species:Caenorhabditis elegans


Alignment Length:203 Identity:49/203 - (24%)
Similarity:88/203 - (43%) Gaps:37/203 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DGLGF--------ISQTIA-LKQR----NPNLKILAVVGGWNEGSTKYSAMA-ADPAKRATFVST 130
            |.:||        .|:|.: ||::    :.:.|.|..:||  ..:|::..:. |||.::..|..:
 Worm   109 DRIGFDGSVEVDHSSRTFSKLKEKSKIESSHFKKLLSIGG--RSNTQFLPLVIADPRRKRRFFKS 171

  Fly   131 SLAFIQQYSFDGLDLDWEYPGQRGGSEADRENFVTLLRE-IKETYDQYGLELGIAVGASEKSASI 194
            .::.:::|..||:||.|::.......:..|  |:..|:: :||....|.|.:.|   ..::.:|.
 Worm   172 IISILEEYQLDGVDLLWKWAKNSNTKKCSR--FLCELKQKLKERKKNYVLSVQI---LPDEPSSW 231

  Fly   195 SYDIPAISQHLTFINVMTYDFHMALDGYLGLNAPLPEVAESIDYWL-SHGAPAEKLILGIGFYGH 258
            ....||....|   |:...|.:         ..|..||.|..|..| |....::||.:.|  :..
 Worm   232 ELFNPANGSPL---NIQVEDCN---------TGPDTEVVEPSDSELESTENNSKKLTVDI--FKF 282

  Fly   259 SYQMSDSS 266
            .|..||.:
 Worm   283 CYITSDGN 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 49/203 (24%)
CBM_14 420..462 CDD:426342
chil-27NP_496035.1 Glyco_hydro_18 97..>229 CDD:425828 30/126 (24%)
Glyco_hydro_18 272..>402 CDD:425828 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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