DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht4 and chil-27

DIOPT Version :9

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_496035.1 Gene:chil-27 / 188616 WormBaseID:WBGene00011848 Length:407 Species:Caenorhabditis elegans


Alignment Length:203 Identity:49/203 - (24%)
Similarity:88/203 - (43%) Gaps:37/203 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DGLGF--------ISQTIA-LKQR----NPNLKILAVVGGWNEGSTKYSAMA-ADPAKRATFVST 130
            |.:||        .|:|.: ||::    :.:.|.|..:||  ..:|::..:. |||.::..|..:
 Worm   109 DRIGFDGSVEVDHSSRTFSKLKEKSKIESSHFKKLLSIGG--RSNTQFLPLVIADPRRKRRFFKS 171

  Fly   131 SLAFIQQYSFDGLDLDWEYPGQRGGSEADRENFVTLLRE-IKETYDQYGLELGIAVGASEKSASI 194
            .::.:::|..||:||.|::.......:..|  |:..|:: :||....|.|.:.|   ..::.:|.
 Worm   172 IISILEEYQLDGVDLLWKWAKNSNTKKCSR--FLCELKQKLKERKKNYVLSVQI---LPDEPSSW 231

  Fly   195 SYDIPAISQHLTFINVMTYDFHMALDGYLGLNAPLPEVAESIDYWL-SHGAPAEKLILGIGFYGH 258
            ....||....|   |:...|.:         ..|..||.|..|..| |....::||.:.|  :..
 Worm   232 ELFNPANGSPL---NIQVEDCN---------TGPDTEVVEPSDSELESTENNSKKLTVDI--FKF 282

  Fly   259 SYQMSDSS 266
            .|..||.:
 Worm   283 CYITSDGN 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 49/203 (24%)
Glyco_18 28..351 CDD:214753 49/203 (24%)
CBM_14 421..462 CDD:279884
chil-27NP_496035.1 Glyco_hydro_18 89..>228 CDD:279094 30/125 (24%)
GH18_chitinase-like 97..>235 CDD:299167 31/132 (23%)
Glyco_hydro_18 261..>402 CDD:279094 9/32 (28%)
GH18_chitinase-like 268..>407 CDD:299167 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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