DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht4 and chil-3

DIOPT Version :10

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_496128.1 Gene:chil-3 / 182432 WormBaseID:WBGene00007467 Length:447 Species:Caenorhabditis elegans


Alignment Length:367 Identity:69/367 - (18%)
Similarity:149/367 - (40%) Gaps:92/367 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LCTHISYTFF----GISDAGEFKSLDTWLDMDDGLGFISQTIALKQRNPNLKILAVVGGWNEGST 112
            :.|||.|.|.    |:......::...:.:|......:|.|:         |::..||| ::.|.
 Worm   120 MVTHIIYLFARPTNGVMTLDGERTRRKFQEMRSKAREVSSTV---------KVMISVGG-HDHSG 174

  Fly   113 KYSAMAADPAKRATFVSTSLAFIQQYSFDGLDLDWEYPGQRGGSEADRENFVTLLREIKETY--- 174
            .:||:.::.|.|:.|:.:.::|::....||:::.|.:|..|     |..|:...:::::..:   
 Worm   175 AFSAIMSNEASRSVFIKSIVSFVKNEDIDGIEIFWMWPKHR-----DVNNYSIFIQDLRNEFTEL 234

  Fly   175 -------DQYGLELGIAVGASEKSASISYDIPAISQHLTFINVMTYDFHMALDGYLGLNAPL--- 229
                   ::|.:.|.:     .|.:..|:|.....:.:.|.|:.:..|.   :..:|.::||   
 Worm   235 QKRTNRKNEYIISLLV-----PKKSYWSFDFEDFLKFVDFFNIYSTQFR---EKQVGPDSPLYGG 291

  Fly   230 --PEVAESIDYWLSHGAPAEKLILGIGFYGHSYQMSD-----------SSQNWPGAACIGPGTAG 281
              ..:.|::.|:........|..:.:.|:|..::.::           ..:|.         |.|
 Worm   292 EGRNIDETMKYYTCKTGQPSKFNIFVSFHGTFWKDAELPLRNDFDDIFKDKNL---------TKG 347

  Fly   282 VYTRENGFLGYHEICLNNW-----------QTVFDQENGAPYAFQGDQWIGYDNPESIQLKMQLV 335
            .:.     :.:.|:....|           :|.:....|.|..|     :..::..|::.|.:.|
 Worm   348 AFA-----VRWRELLQQKWNLEDIKFHNLTKTSYIWIPGPPTWF-----MTLEDKRSLREKTKYV 402

  Fly   336 ESRNLGGAMMWSIETDDFRGLCGESYPLLKTMNRA---LGRE 374
            ...|:||..||:|:.||      :.:.|||.::.|   .|:|
 Worm   403 ADYNIGGITMWTIDQDD------DDHTLLKVVSSAELCTGKE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 67/362 (19%)
CBM_14 420..462 CDD:426342
chil-3NP_496128.1 Glyco_18 100..418 CDD:214753 61/339 (18%)
Blue background indicates that the domain is not in the aligned region.

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