DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht4 and chil-24

DIOPT Version :9

Sequence 1:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_494455.1 Gene:chil-24 / 173661 WormBaseID:WBGene00020407 Length:410 Species:Caenorhabditis elegans


Alignment Length:408 Identity:82/408 - (20%)
Similarity:160/408 - (39%) Gaps:110/408 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WALAALCLCLGQVASSEKLLNCYWGTWANYRPGDG--KFTPS------------DIDPSLCTHIS 57
            |.:...|        .||..:.::...:||:..:.  :.|||            ||.......::
 Worm    21 WKVCRHC--------HEKQDSTFFSIHSNYKMSNNETETTPSRIVGFYADWERTDITSHQVAKLT 77

  Fly    58 YTFFGISDAGEFKSLDTWLDMDDGLGFISQTIALK--------QRN--PNLKILAVVGGWNEGST 112
            :..|..          ..:..|..|||.:....::        :||  .|:|::..:||:.....
 Worm    78 HAVFAY----------VQMKFDGSLGFKNDAARIRFSNLRDKVRRNEDSNVKMMISIGGFENSQH 132

  Fly   113 KYSAMAADPAKRATFVSTSLAFIQQYSFDGLDLDWEYPGQRGGSEADRENFVTLLREIKETYDQY 177
            .|..::....|:| |:::..:|:..:...|:|:.|::|     |..|:.::...|.::::   ..
 Worm   133 FYPVLSNVEMKKA-FLNSISSFLAYHELHGVDIFWKWP-----SPEDKAHYSRFLADLRQ---HL 188

  Fly   178 GLELGIAVGASEKSAS---ISYDIPAISQHLTFINVMTYDFHMALDGYLGLNAPLPE-------- 231
            |.|..|:|...:...|   :.||:..||.|:.|.||.:.|::          .|.|.        
 Worm   189 GYEFIISVAVPQAEVSNLELGYDLRTISSHVDFFNVHSMDYY----------GPWPNEWGKPTGP 243

  Fly   232 -------VAESIDYWLSH-----GAPAEKLILGIGFYGHSYQMSDSSQNWPGAACIGPGT---AG 281
                   ...::|:.|.:     |.|. ||.:.|.|:...:      :|.|..  :.||.   ..
 Worm   244 ISPLYGPTRHNVDWTLRYYAEKTGEPG-KLNMVIPFFVRLW------KNVPEP--VEPGRQVFRD 299

  Fly   282 VYTRENGFLGYHEICLNNWQTV----------FDQENGAPYAFQGD--QWIGYDNPESIQLKMQL 334
            |...:|...|  |..::.|...          :|:|..:.|.:..|  .::.::..:|||.||:.
 Worm   300 VELVDNKPQG--EAYMSRWSAQHEELDLSPADWDEETRSSYTWNPDTRNFVTFETDKSIQEKMKY 362

  Fly   335 VESRNLGGAMMWSIETDD 352
            |:.:||||..:|.::.::
 Worm   363 VKEKNLGGVWIWHVDANE 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 78/389 (20%)
Glyco_18 28..351 CDD:214753 78/384 (20%)
CBM_14 421..462 CDD:279884
chil-24NP_494455.1 Glyco_18 55..378 CDD:214753 73/362 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164268
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4747
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.740

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